Protein Alignment rdo and LOC563710

DIOPT Version :10

• Sequence 1: NP_001286024.1
• Gene: rdo / 35077
• FlyBaseID: FBgn0243486
• Length: 757
• Species: Drosophila melanogaster
• Sequence 2: XP_692159.4
• Gene: LOC563710 / 563710
• -ID: -
• Length: 635
• Species: Danio rerio
• Alignment Length: 788
• Identity: 161/788 - (20%)
• Similarity: 259/788 - (32%)
• Gaps: 269/788 - (34%)

  Fly     1 MLFKWLLFSLCIMPAMFSNT----KRKCPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVK 61
            |..:|.:..| :|.|..|.|    :|.||..|:|     |.....|.......:  |..|....:
Zfish     5 MRHRWFMVPL-LMQAWLSATPCFGERPCPRSCRC-----DGKIVYCESSAFRDV--PKNLSGGCQ 61

  Fly    62 VIIIRGPRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNF 126
                         |.:||.           ::|.::.|..|.||..|..|.|..|.|.|:....|
Zfish    62 -------------GLSLRY-----------NSLASLKAGQFVGLNQLIWLYLDHNYIANVDARAF 102

  Fly   127 RGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQ 191
            :|...|.||.||.||:..:.::||..:.:||.|:|:.|.:..|....|..|.:|..|.:..|.|:
Zfish   103 QGIRRLKELILSSNKITLLHNTTFHLVPNLRNLDLSYNKLQALQPGQFQGLRKLLSLHMRSNSLK 167

  Fly   192 DLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVL 256
            :|...:|:|        |||                |..||||.|..:.:.::....:.:||::.
Zfish   168 NLPSRLFQD--------CRN----------------LEFLDLGYNRLRSITRNSMSGLLKLTELH 208

  Fly   257 LDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSL 321
            ::.||.|.:....|....:|..|.|.:||:..:........|:|..||||.|.|..::.:..|::
Zfish   209 IEHNQFSKINFFNFPRFYNLRALYLQWNRIRTMSEGLTWMWTSLQKLDLSGNDLQEIDAEVYRAM 273

  Fly   322 SNLLTLNISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLIPQLTHLAIADMGTMPVGLLHPFK 386
            .||.|||:..|.|:
Zfish   274 PNLQTLNLDSNKLV--------------------------------------------------- 287

  Fly   387 QLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRIQGIRNVRLDNNPLICDEC 451
                         |.:.|.:|....|..:.|:.|.                   .|..|::|
Zfish   288 -------------NVSQEAVDAWTSLTAISLAGNM-------------------WDCGPVVC--- 317

  Fly   452 HMGKLINVVRQLQWKWDTYPICFLPKSLRGAEI-NNLDINGLHTC--------LTFITDE----- 502
               .|:..:|..:...:...||..||.::|.:: :.:|.||:  |        ..|:...
Zfish   318 ---PLVAWMRTFRGNKEINMICASPKEVQGEKVLDAVDANGV--CRIAPATPSTIFVPSTPFVAF 377

  Fly   503 EQNAASTSYNFLEHGGLNTL-------------------------------AILGGIIFVLIAVI 536
            .|..||:....|:.|....:                               .|:.|.:.:.::|.
Zfish   378 SQTPASSLVPTLKSGDSRRVHGTSLEGSTSSVPSQPDVPPQEQDFEPVSFHKIVAGSVALFLSVA 442

  Fly   537 ILSLVACFSKNRARYYTREDHLNGSESKCLEKNLEAT--TITT-------------------LGN 580
            ::.||...|..|.....::...|.:.::...|....|  |::|                   |.|
Zfish   443 MILLVIYVSWKRYPSSVKQLQENSAAARKRRKKSRETERTLSTPLQEYYVDYKPNNTEGTDVLVN 507

  Fly   581 GSSPTTTT--------------TLTL------------ATSPAAPN----GPKTNGQGLSLSPAN 615
            |:.|.|.|              |||.            |..|...|    ||..:.:||...|..
Zfish   508 GTGPCTYTISGSRECEVPHQMSTLTFYRYEQPIVDYCQAHQPLRLNMSYEGPPQSLEGLEELPPR 572

  Fly   616 GSTPVHGISDDKGKEINFTFPVDDRVCTIDELMPSPPPPPQQH--------PHPNM-GSLMYSVS 671
            ..:.:..::          .|.   |.||:.....|..||.|.        |:|.. .|:.|..:
Zfish   573 ERSTIQTVA----------LPA---VPTINTGTTGPCSPPSQRAPMEGPSIPYPTTERSINYPTT 624

  Fly   672 HSPNSATT 679
            ....|..|
Zfish   625 ERSTSTLT 632

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdo	NP_001286024.1	LRR	69..>446	CDD:443914	83/376 (22%)
		leucine-rich repeat	84..107	CDD:275380	5/22 (23%)
		leucine-rich repeat	108..131	CDD:275380	8/22 (36%)
		leucine-rich repeat	132..155	CDD:275380	9/22 (41%)
		leucine-rich repeat	156..179	CDD:275380	8/22 (36%)
		leucine-rich repeat	180..203	CDD:275380	7/22 (32%)
		leucine-rich repeat	204..251	CDD:275380	9/46 (20%)
		leucine-rich repeat	252..275	CDD:275380	6/22 (27%)
		leucine-rich repeat	276..299	CDD:275380	5/22 (23%)
		leucine-rich repeat	300..323	CDD:275380	8/22 (36%)
		leucine-rich repeat	388..411	CDD:275380	3/22 (14%)
LOC563710	XP_692159.4	leucine-rich repeat	60..83	CDD:275380	8/46 (17%)
		LRR	63..>308	CDD:443914	80/343 (23%)
		leucine-rich repeat	84..107	CDD:275380	8/22 (36%)
		leucine-rich repeat	108..131	CDD:275380	9/22 (41%)
		leucine-rich repeat	132..155	CDD:275380	8/22 (36%)
		leucine-rich repeat	156..179	CDD:275380	8/30 (27%)
		leucine-rich repeat	180..203	CDD:275380	6/22 (27%)
		leucine-rich repeat	204..227	CDD:275380	6/22 (27%)
		leucine-rich repeat	228..251	CDD:275380	5/22 (23%)
		leucine-rich repeat	252..275	CDD:275380	8/22 (36%)