Protein Alignment rdo and Tl

DIOPT Version :10

• Sequence 1: NP_001286024.1
• Gene: rdo / 35077
• FlyBaseID: FBgn0243486
• Length: 757
• Species: Drosophila melanogaster
• Sequence 2: NP_001262995.1
• Gene: Tl / 43222
• FlyBaseID: FBgn0262473
• Length: 1117
• Species: Drosophila melanogaster
• Alignment Length: 198
• Identity: 46/198 - (23%)
• Similarity: 70/198 - (35%)
• Gaps: 50/198 - (25%)

  Fly   275 LYDALKPKDAKEEPATTTAATA------TPAAAAAPAETPAPLANPNGDAPLAPLPANPNGDAPL 333
            |.:.|.|..::....|||..|:      |.::.:....:..|..:....|..|..|||
  Fly    31 LREPLVPTGSRPSSTTTTTTTSKNTTTVTTSSTSNTTSSKHPSKSSKSTATKANTPAN------- 88

  Fly   334 APIPTEATPLATTPAAEGETTATTTTTTTLETSSS--------------ENPLGMAPLAPMPDSA 384
                   |..|...:..|.:||.|..|||..|:|:              :.|.|...||...:.|
  Fly    89 -------TKKANDSSKTGPSTAATAATTTTATTSAASNRRQESGESYELDGPCGTTALADASELA 146

  Fly   385 ----PATPADGTPNASGSDVEVRHSSLNVQPDLSASMAEPAKGG------AAEIVRLPSSIAMML 439
                .|.|.:|.|.|:.:      ..|......:|:.|...:||      ||...:..|.:.:.|
  Fly   147 TFADDAGPRNGIPAAAAA------GPLGAGRGGAAATAASPRGGPGKEPAAAGAPKSKSKLQLKL 205

  Fly   440 GLL 442
            |.|
  Fly   206 GRL 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdo	NP_001286024.1	LRR	69..>446	CDD:443914	46/198 (23%)
		leucine-rich repeat	84..107	CDD:275380
		leucine-rich repeat	108..131	CDD:275380
		leucine-rich repeat	132..155	CDD:275380
		leucine-rich repeat	156..179	CDD:275380
		leucine-rich repeat	180..203	CDD:275380
		leucine-rich repeat	204..251	CDD:275380
		leucine-rich repeat	252..275	CDD:275380	46/198 (23%)
		leucine-rich repeat	276..299	CDD:275380	7/28 (25%)
		leucine-rich repeat	300..323	CDD:275380	3/22 (14%)
		leucine-rich repeat	388..411	CDD:275380	5/22 (23%)
Tl	NP_001262995.1	LRR_8	174..233	CDD:404697	10/35 (29%)
		leucine-rich repeat	176..198	CDD:275380	5/21 (24%)
		leucine-rich repeat	199..222	CDD:275380	4/10 (40%)
		LRR	222..576	CDD:443914
		leucine-rich repeat	223..270	CDD:275380
		leucine-rich repeat	271..294	CDD:275380
		leucine-rich repeat	295..320	CDD:275380
		leucine-rich repeat	321..343	CDD:275380
		leucine-rich repeat	344..367	CDD:275380
		leucine-rich repeat	368..391	CDD:275380
		leucine-rich repeat	392..415	CDD:275380
		leucine-rich repeat	416..439	CDD:275380
		leucine-rich repeat	440..474	CDD:275380
		leucine-rich repeat	475..498	CDD:275380
		leucine-rich repeat	499..520	CDD:275380
		leucine-rich repeat	523..552	CDD:275380
		LRRCT	561..619	CDD:214507
		LRRNT	631..667	CDD:214470
		PPP1R42	<660..752	CDD:455733
		leucine-rich repeat	664..693	CDD:275380
		leucine-rich repeat	694..715	CDD:275380
		leucine-rich repeat	716..737	CDD:275380
		LRRCT	751..800	CDD:214507
		TIR	858..996	CDD:214587