Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262529.1 | Gene: | 2mit / 41616 | FlyBaseID: | FBgn0260793 | Length: | 1155 | Species: | Drosophila melanogaster |
Alignment Length: | 660 | Identity: | 164/660 - (24%) |
---|---|---|---|
Similarity: | 237/660 - (35%) | Gaps: | 152/660 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 83 KLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMAS 147
Fly 148 STFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNC 212
Fly 213 QLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLN 277
Fly 278 HLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLREMRE 342
Fly 343 TFEPLIYYFFLTCSKLFFQLIPQLTHLAIADMGTMPVGLLHPFKQLRYLNISGNSLNNTALEVID 407
Fly 408 PCRELEF-----------LDLSRN--QLHGISEDTVLRIQGIRNVRLDNNPLICDECHMGKLINV 459
Fly 460 VRQLQWKWDTYPICFLPKSLRGAEINNLDINGLHTCLTFITDEEQNAASTSYNFLEHGGLNTLAI 524
Fly 525 LGGIIFVLIAVIILSLVACFSKNRARYYTREDHLNGSESKCLEKNLEATTITTLGNGSSPTTTTT 589
Fly 590 LTLATSPAAPNGPKTNGQGLSLSPANGSTPVHGISDDKGKEINFTFPVDDRVCTIDELMPSPPPP 654
Fly 655 PQQHPHPNMGSLMYSVSHSPNSATTLAAV------AAAATVIPPGAPSHSSMPTPTPTPAEAVVV 713
Fly 714 VLPPPPLPPQ 723 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) |
leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 131..190 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 151..422 | CDD:238064 | 77/283 (27%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 178..262 | CDD:290566 | 25/83 (30%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 204..251 | CDD:275380 | 13/46 (28%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 274..334 | CDD:290566 | 26/59 (44%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 298..342 | CDD:289563 | 17/43 (40%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 5/22 (23%) | ||
2mit | NP_001262529.1 | LRR_RI | 124..355 | CDD:238064 | 53/163 (33%) |
leucine-rich repeat | 124..143 | CDD:275380 | |||
leucine-rich repeat | 144..167 | CDD:275380 | |||
leucine-rich repeat | 172..194 | CDD:275380 | 164/660 (25%) | ||
LRR_8 | 193..253 | CDD:290566 | 24/58 (41%) | ||
leucine-rich repeat | 195..218 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 219..242 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 241..301 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 243..311 | CDD:275380 | 21/67 (31%) | ||
leucine-rich repeat | 312..335 | CDD:275380 | 7/25 (28%) | ||
LRR_8 | 334..415 | CDD:290566 | 30/83 (36%) | ||
leucine-rich repeat | 336..359 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 360..380 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 379..460 | CDD:290566 | 32/110 (29%) | ||
LRR_4 | 379..>415 | CDD:289563 | 16/35 (46%) | ||
leucine-rich repeat | 381..404 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 405..449 | CDD:275380 | 17/64 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45453582 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |