Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001919052.2 | Gene: | tlr5a / 403138 | ZFINID: | ZDB-GENE-040219-14 | Length: | 881 | Species: | Danio rerio |
Alignment Length: | 676 | Identity: | 142/676 - (21%) |
---|---|---|---|
Similarity: | 212/676 - (31%) | Gaps: | 296/676 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLFKWLLFSLCIMPAMFSNTKRKCPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVIII 65
Fly 66 RGPRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITE------- 123
Fly 124 ------------------NNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLA----DNSI 166
Fly 167 VELVQRNFFM-LSRLKYLDLSGNPLQDLQP-DVFRDVPELKVL-----KCRN-CQLKKINPQ--M 221
Fly 222 YNLLPL--------------------------LSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGN 260
Fly 261 QLSVVVDQLFRMQKS--------------------------------------------LNHLDL 281
Fly 282 SYNRLAKVPNDSFLQLTNL----------------TF--------LDLSYNKLVRLEPQSIRSLS 322
Fly 323 NLLTLNISGNVLMDLREMRETFEPLIYYFFLTCSKL-----------FFQLIPQLT-HLAIADMG 375
Fly 376 TMPVG-------LLHPFKQLRYLNISGNSL------------------------------NNTAL 403
Fly 404 EVIDPCRELEFLDLSRNQLHGISEDTVLRIQGIRNVRLDNNPLICDECHMGKLINVVRQLQWKWD 468
Fly 469 TYPICFLPKSLRGAEINNLDINGLHT 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 2/22 (9%) |
leucine-rich repeat | 108..131 | CDD:275380 | 9/47 (19%) | ||
LRR_8 | 131..190 | CDD:290566 | 25/63 (40%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 151..422 | CDD:238064 | 97/427 (23%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 9/27 (33%) | ||
LRR_8 | 178..262 | CDD:290566 | 27/118 (23%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 204..251 | CDD:275380 | 16/80 (20%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 274..334 | CDD:290566 | 31/127 (24%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 6/22 (27%) | ||
LRR_4 | 298..342 | CDD:289563 | 24/67 (36%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 14/46 (30%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 6/52 (12%) | ||
tlr5a | XP_001919052.2 | LRR_8 | 50..107 | CDD:290566 | 13/56 (23%) |
leucine-rich repeat | 50..72 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 73..97 | CDD:275380 | 2/23 (9%) | ||
LRR_8 | 96..158 | CDD:290566 | 25/64 (39%) | ||
leucine-rich repeat | 98..121 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 122..147 | CDD:275380 | 9/27 (33%) | ||
leucine-rich repeat | 148..172 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 173..230 | CDD:275380 | 9/56 (16%) | ||
LRR_RI | <218..478 | CDD:238064 | 59/277 (21%) | ||
LRR_8 | 291..349 | CDD:290566 | 9/57 (16%) | ||
leucine-rich repeat | 297..316 | CDD:275380 | 0/18 (0%) | ||
leucine-rich repeat | 317..340 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 339..399 | CDD:290566 | 23/59 (39%) | ||
leucine-rich repeat | 341..364 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 365..388 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 387..444 | CDD:290566 | 18/68 (26%) | ||
leucine-rich repeat | 389..410 | CDD:275380 | 10/32 (31%) | ||
leucine-rich repeat | 411..433 | CDD:275380 | 3/21 (14%) | ||
leucine-rich repeat | 434..513 | CDD:275380 | 11/78 (14%) | ||
leucine-rich repeat | 485..499 | CDD:275378 | 0/13 (0%) | ||
LRR_8 | 513..570 | CDD:290566 | 19/80 (24%) | ||
leucine-rich repeat | 514..537 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 538..559 | CDD:275380 | 6/41 (15%) | ||
leucine-rich repeat | 560..581 | CDD:275380 | 4/16 (25%) | ||
LRRCT | 589..638 | CDD:214507 | |||
TIR | 705..839 | CDD:214587 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |