Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005170910.1 | Gene: | tlr2 / 403125 | ZFINID: | ZDB-GENE-040219-6 | Length: | 818 | Species: | Danio rerio |
Alignment Length: | 662 | Identity: | 149/662 - (22%) |
---|---|---|---|
Similarity: | 228/662 - (34%) | Gaps: | 227/662 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 KCPTECQCSMDDLDRYQAICTKGGLNSLLS-PNE-LDVDVKVIIIRGPRNSITIGPALRQFMKLE 85
Fly 86 ILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTF 150
Fly 151 RHLTDLRRLNLADNSIVELVQRNFF-MLSRLKYLDLSGNPLQDLQP---DVFRDVPEL-----KV 206
Fly 207 LKCRNCQLKKINP------QMYNLLPLLSEL------DLGRNEFKFLDKD----------EFRDV 249
Fly 250 KR-----------------LTKVL--LDGNQLSVV-VDQL-------FRMQKSLNH--LDLSYNR 285
Fly 286 ------------------LAK--------------VPNDSFLQLTNLTFLDLSYNKLVRLEPQ-- 316
Fly 317 ---SIRSLSNLLTLNISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLIPQLTHLAIADMG--- 375
Fly 376 --TMPVGLLHPFKQLRYLNISGNSLNNTALEVIDPC--RELEFLDLSRNQLHGISED----TVLR 432
Fly 433 IQGIRNVRLDNNPLICDECHMGKLI----------NVVRQLQWKWDTYPICFLPKSLRG------ 481
Fly 482 --AEINNL------------DINGLHTCLTFITDEEQNAASTSYNFLEHGGLNTLAILGGIIFVL 532
Fly 533 IAVIILSLVACF 544 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 3/22 (14%) |
leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 131..190 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | 151..422 | CDD:238064 | 88/374 (24%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 178..262 | CDD:290566 | 28/132 (21%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 204..251 | CDD:275380 | 14/73 (19%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 7/32 (22%) | ||
LRR_8 | 274..334 | CDD:290566 | 24/98 (24%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 8/56 (14%) | ||
LRR_4 | 298..342 | CDD:289563 | 18/48 (38%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 8/27 (30%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 9/24 (38%) | ||
tlr2 | XP_005170910.1 | leucine-rich repeat | 85..105 | CDD:275378 | 5/48 (10%) |
leucine-rich repeat | 106..129 | CDD:275378 | 9/22 (41%) | ||
LRR_8 | 108..163 | CDD:290566 | 22/54 (41%) | ||
leucine-rich repeat | 130..153 | CDD:275378 | 9/22 (41%) | ||
leucine-rich repeat | 154..178 | CDD:275378 | 7/23 (30%) | ||
leucine-rich repeat | 179..192 | CDD:275378 | 4/12 (33%) | ||
LRR_RI | <390..501 | CDD:238064 | 41/135 (30%) | ||
leucine-rich repeat | 390..418 | CDD:275380 | 8/27 (30%) | ||
LRR_8 | 418..478 | CDD:290566 | 23/84 (27%) | ||
leucine-rich repeat | 419..444 | CDD:275380 | 11/43 (26%) | ||
leucine-rich repeat | 445..467 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 468..488 | CDD:275380 | 9/24 (38%) | ||
leucine-rich repeat | 489..508 | CDD:275380 | 7/18 (39%) | ||
leucine-rich repeat | 509..530 | CDD:275380 | 8/30 (27%) | ||
leucine-rich repeat | 531..554 | CDD:275380 | 6/33 (18%) | ||
TIR | 671..814 | CDD:214587 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |