| Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_991392.1 | Gene: | Tlr12 / 384059 | MGIID: | 3045221 | Length: | 906 | Species: | Mus musculus |
| Alignment Length: | 755 | Identity: | 170/755 - (22%) |
|---|---|---|---|
| Similarity: | 270/755 - (35%) | Gaps: | 199/755 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 76 PALRQFMKLEILRITDSNLPAIGAESFWGLKYLRIL-------DLSKNNITNITENNFRGQDNLL 133
Fly 134 ELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQD--LQPD 196
Fly 197 VFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQ 261
Fly 262 LSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQ-SIRSLSNLL 325
Fly 326 TLNISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLIPQLTHLAIADMGTMPVGLLHP--FKQL 388
Fly 389 RYLNISGNSL-----NNTALEVIDPCRELEFLDLSRNQLHGI-SEDT------------VLRIQG 435
Fly 436 ---------------IRNVRLDNNPLICD--ECHMGKLINVVRQLQWKWDTYPICFLP----KSL 479
Fly 480 RGAEINNLDINGLHTCLTFITDEEQNAASTSYNFLEHGGLNTLAILGGIIFVLIAVIILSLVACF 544
Fly 545 SKN-----------RARYYTREDHLNGSESKCLEKNLEATTITTLGNGSSP---------TTTTT 589
Fly 590 LTLATSP------AAPNGPKTNGQGLSLSPANGSTPVHGI--SDDKGKEINFTFPV------DDR 640
Fly 641 VCTIDELMPSPP---PP--------PQQHPHPNMGSLMYSVSHSPNSATTLAAVAAAATVIPP-- 692
Fly 693 -GAPSHSSMPTPTPTPAEAVVVVLPPPPLPPQQHHHQMDG 731 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) |
| leucine-rich repeat | 108..131 | CDD:275380 | 3/29 (10%) | ||
| LRR_8 | 131..190 | CDD:290566 | 14/58 (24%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 3/22 (14%) | ||
| LRR_RI | 151..422 | CDD:238064 | 78/280 (28%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 178..262 | CDD:290566 | 30/85 (35%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 11/24 (46%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 13/46 (28%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 274..334 | CDD:290566 | 17/60 (28%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 7/22 (32%) | ||
| LRR_4 | 298..342 | CDD:289563 | 12/44 (27%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 5/23 (22%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 8/27 (30%) | ||
| Tlr12 | NP_991392.1 | LRR 1 | 91..114 | ||
| leucine-rich repeat | 94..116 | CDD:275380 | |||
| LRR 2 | 115..140 | ||||
| leucine-rich repeat | 117..143 | CDD:275380 | |||
| LRR 3 | 142..170 | ||||
| leucine-rich repeat | 144..191 | CDD:275380 | |||
| LRR 4 | 198..222 | 1/4 (25%) | |||
| leucine-rich repeat | 201..224 | CDD:275380 | 2/6 (33%) | ||
| LRR 5 | 224..247 | 8/23 (35%) | |||
| leucine-rich repeat | 225..247 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 248..293 | CDD:275380 | 6/53 (11%) | ||
| LRR 6 | 267..290 | 3/31 (10%) | |||
| LRR_8 | 269..328 | CDD:290566 | 14/58 (24%) | ||
| LRR 7 | 291..314 | 4/22 (18%) | |||
| leucine-rich repeat | 294..317 | CDD:275380 | 4/22 (18%) | ||
| LRR 8 | 316..338 | 10/21 (48%) | |||
| leucine-rich repeat | 318..343 | CDD:275380 | 11/24 (46%) | ||
| LRR 9 | 341..364 | 5/22 (23%) | |||
| LRR_8 | 342..402 | CDD:290566 | 18/59 (31%) | ||
| leucine-rich repeat | 344..367 | CDD:275380 | 5/22 (23%) | ||
| LRR_RI | 364..625 | CDD:238064 | 78/319 (24%) | ||
| LRR 10 | 366..388 | 8/21 (38%) | |||
| leucine-rich repeat | 368..391 | CDD:275380 | 7/22 (32%) | ||
| LRR 11 | 389..412 | 10/38 (26%) | |||
| leucine-rich repeat | 392..415 | CDD:275380 | 12/43 (28%) | ||
| LRR 12 | 414..436 | 8/30 (27%) | |||
| leucine-rich repeat | 416..436 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 440..512 | CDD:275380 | 25/93 (27%) | ||
| LRR 13 | 462..484 | 9/33 (27%) | |||
| LRR 14 | 485..508 | 7/22 (32%) | |||
| LRR 15 | 510..533 | 7/25 (28%) | |||
| leucine-rich repeat | 513..564 | CDD:275380 | 10/50 (20%) | ||
| LRR 16 | 562..586 | 3/23 (13%) | |||
| leucine-rich repeat | 565..593 | CDD:275380 | 4/27 (15%) | ||
| LRR 17 | 591..614 | 8/29 (28%) | |||
| leucine-rich repeat | 594..617 | CDD:275380 | 8/34 (24%) | ||
| TIR | 761..902 | CDD:214587 | 26/117 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||