| Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_611561.1 | Gene: | Lapsyn / 37418 | FlyBaseID: | FBgn0034602 | Length: | 343 | Species: | Drosophila melanogaster |
| Alignment Length: | 380 | Identity: | 89/380 - (23%) |
|---|---|---|---|
| Similarity: | 148/380 - (38%) | Gaps: | 95/380 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 180 LKYLDLSGNPLQ-DLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDK 243
Fly 244 DEFR---DVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDL 305
Fly 306 SYNKLVRLEPQSIRS--LSNLLTLNISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLIPQLTH 368
Fly 369 LAIADMGTMPVGLLHPFKQLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRI 433
Fly 434 QGIRNVRLDNNPLICDECHMGKLINVVRQLQWKWDTYPICFLPKSLRGAEI-NNLDING--LHTC 495
Fly 496 LTFITDEEQNAASTSYNFLEHGGLNTLAILGGIIFVLIAVIILSLVACFSKNRAR 550 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | |
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| LRR_8 | 131..190 | CDD:290566 | 3/9 (33%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | |||
| LRR_RI | 151..422 | CDD:238064 | 64/247 (26%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | |||
| LRR_8 | 178..262 | CDD:290566 | 23/85 (27%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 4/23 (17%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 15/49 (31%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 274..334 | CDD:290566 | 21/61 (34%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 10/22 (45%) | ||
| LRR_4 | 298..342 | CDD:289563 | 12/45 (27%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 6/24 (25%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 7/22 (32%) | ||
| Lapsyn | NP_611561.1 | leucine-rich repeat | 39..59 | CDD:275380 | 8/22 (36%) |
| LRR_8 | 58..118 | CDD:290566 | 22/62 (35%) | ||
| leucine-rich repeat | 60..83 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 84..107 | CDD:275380 | 9/25 (36%) | ||
| LRR_RI | <94..>249 | CDD:238064 | 49/224 (22%) | ||
| LRR_8 | 106..167 | CDD:290566 | 21/61 (34%) | ||
| LRR_4 | 106..145 | CDD:289563 | 15/39 (38%) | ||
| leucine-rich repeat | 108..130 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 131..154 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 157..178 | CDD:275380 | 9/62 (15%) | ||
| leucine-rich repeat | 179..202 | CDD:275380 | 7/22 (32%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR24366 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||