| Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001259135.1 | Gene: | hfw / 31120 | FlyBaseID: | FBgn0001189 | Length: | 611 | Species: | Drosophila melanogaster |
| Alignment Length: | 477 | Identity: | 101/477 - (21%) |
|---|---|---|---|
| Similarity: | 179/477 - (37%) | Gaps: | 136/477 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 114 SKNNI---TNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFF 175
Fly 176 MLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKF 240
Fly 241 LDKDEFRDVKRLTKVLLDGN--QLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQ--LTNLT 301
Fly 302 FLDLSYNKLVRLEPQSIRSLSNLLTL------NISGNVLMDLREMRETFEPLIYYFFLTCSKLFF 360
Fly 361 QLIPQ----------LTHLAIADMG----TMPVGLLHPFKQLRYLNISGNSLNNTALEVIDPCRE 411
Fly 412 LEFLD------LSRNQLHGISE---DTVLRIQGI-RNVRLDNNPLICDECHMGKLINVVRQLQWK 466
Fly 467 WDTYPICFLPKSLRGAEI-NNLDINGLHTCLTFITDEEQNAASTSYNFLEHGGLNTLAILGGIIF 530
Fly 531 VLIAVIILSLVACFSKNRARYY 552 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | |
| leucine-rich repeat | 108..131 | CDD:275380 | 6/19 (32%) | ||
| LRR_8 | 131..190 | CDD:290566 | 19/58 (33%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 5/22 (23%) | ||
| LRR_RI | 151..422 | CDD:238064 | 61/300 (20%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 178..262 | CDD:290566 | 20/85 (24%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 9/46 (20%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 3/24 (13%) | ||
| LRR_8 | 274..334 | CDD:290566 | 13/67 (19%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 5/24 (21%) | ||
| LRR_4 | 298..342 | CDD:289563 | 8/49 (16%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 5/22 (23%) | ||
| hfw | NP_001259135.1 | LRR_8 | 235..294 | CDD:290566 | 20/69 (29%) |
| leucine-rich repeat | 237..259 | CDD:275378 | 8/22 (36%) | ||
| leucine-rich repeat | 260..283 | CDD:275378 | 7/22 (32%) | ||
| leucine-rich repeat | 284..304 | CDD:275378 | 7/34 (21%) | ||
| leucine-rich repeat | 420..443 | CDD:275378 | 6/32 (19%) | ||
| leucine-rich repeat | 444..465 | CDD:275378 | 3/20 (15%) | ||
| leucine-rich repeat | 466..497 | CDD:275378 | 6/30 (20%) | ||
| leucine-rich repeat | 498..509 | CDD:275378 | 4/10 (40%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR24366 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||