| Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_997487.1 | Gene: | Tlr6 / 305353 | RGDID: | 1303030 | Length: | 806 | Species: | Rattus norvegicus |
| Alignment Length: | 664 | Identity: | 138/664 - (20%) |
|---|---|---|---|
| Similarity: | 233/664 - (35%) | Gaps: | 259/664 - (39%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 110 ILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNF 174
Fly 175 FMLSR-LKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQM--YNLLPLLSEL-DLGR 235
Fly 236 NEFKFLDKDEFRDVK-------RLTKVLLD------------------GNQLSVVV--DQLFRMQ 273
Fly 274 -----KSLNHLDLSYNRLAKVPNDSFLQ--------------LTNLTF--LDLSYNKLVRL---- 313
Fly 314 --EPQSIRSLSNL-LTLNISGNVL---------------------------------MDLREMRE 342
Fly 343 TFEPLIY---------YFFLT-------------CS--KLFFQLIPQLTHL-----------AIA 372
Fly 373 DMGTMPVGL----LHPF-------KQLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGIS 426
Fly 427 ED-----------------------------TVLRI----------------QGIRNVRLDNNPL 446
Fly 447 ICDECHMGKLINVV----RQLQWKW-DTYPICFLPKSLRGAEINNLDINGLHTCLTFITDEEQNA 506
Fly 507 ASTSYNFLEHGGLNTLAILGGIIFVLIAVIILSLVACF--------------SKNRARYYTREDH 557
Fly 558 LNGSESKCLEKNLE 571 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | |
| leucine-rich repeat | 108..131 | CDD:275380 | 4/20 (20%) | ||
| LRR_8 | 131..190 | CDD:290566 | 22/59 (37%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 6/22 (27%) | ||
| LRR_RI | 151..422 | CDD:238064 | 90/408 (22%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 9/22 (41%) | ||
| LRR_8 | 178..262 | CDD:290566 | 26/112 (23%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 11/56 (20%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 11/47 (23%) | ||
| LRR_8 | 274..334 | CDD:290566 | 21/82 (26%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 9/36 (25%) | ||
| LRR_4 | 298..342 | CDD:289563 | 14/85 (16%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 6/30 (20%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 7/22 (32%) | ||
| Tlr6 | NP_997487.1 | leucine-rich repeat | 46..64 | CDD:275380 | 4/20 (20%) |
| leucine-rich repeat | 65..88 | CDD:275378 | 6/22 (27%) | ||
| LRR_8 | 87..144 | CDD:290566 | 21/70 (30%) | ||
| leucine-rich repeat | 89..112 | CDD:275378 | 9/23 (39%) | ||
| leucine-rich repeat | 113..133 | CDD:275378 | 9/32 (28%) | ||
| leucine-rich repeat | 134..158 | CDD:275378 | 6/23 (26%) | ||
| leucine-rich repeat | 369..385 | CDD:275380 | 1/15 (7%) | ||
| LRR_RI | <380..>500 | CDD:238064 | 24/121 (20%) | ||
| LRR_8 | 388..451 | CDD:290566 | 14/62 (23%) | ||
| leucine-rich repeat | 390..415 | CDD:275380 | 4/24 (17%) | ||
| leucine-rich repeat | 416..440 | CDD:275380 | 4/23 (17%) | ||
| leucine-rich repeat | 441..462 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 461..516 | CDD:290566 | 10/56 (18%) | ||
| leucine-rich repeat | 463..485 | CDD:275380 | 6/21 (29%) | ||
| leucine-rich repeat | 486..508 | CDD:275380 | 0/21 (0%) | ||
| leucine-rich repeat | 510..531 | CDD:275380 | 3/20 (15%) | ||
| LRRCT | 540..594 | CDD:214507 | 13/56 (23%) | ||
| TIR | 652..791 | CDD:214587 | 0/1 (0%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||