Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006501523.1 | Gene: | Tlr2 / 24088 | MGIID: | 1346060 | Length: | 794 | Species: | Mus musculus |
Alignment Length: | 617 | Identity: | 135/617 - (21%) |
---|---|---|---|
Similarity: | 239/617 - (38%) | Gaps: | 147/617 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 WLLFSLCIMPAMFSNTKRKCPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVIIIRGPR 69
Fly 70 NSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLE 134
Fly 135 LDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDL-QPDVF 198
Fly 199 RDVPELKVLKCRN----CQLKKINPQMYNLLPLLSELD---LGRNEFKFLDKDEFRDVKRLTKVL 256
Fly 257 LDGN-QLSVVVDQLFRMQKSLNHLDLSYNRLAK-----VPNDSF------LQLTNLTFLDLSYNK 309
Fly 310 LVRLEPQSIRSLSNL----LTLNISG-------NVLMDLRE-----MRETFEPLIYYFFLTCSKL 358
Fly 359 FFQLIPQLTHLAI--ADMGTMPVGLLHPFKQLRYLNISGN-----SLNNTALEVIDPCRELEFLD 416
Fly 417 LSRNQLHGISE--DTVLRIQGIRNVRLDNNPL--ICDECHMGKLINVVRQLQWKWDTYPICFLPK 477
Fly 478 SLRGAEINNLDINGLHTCL--TFITDEEQNAASTSYN---------FLEHGGLNTLAILGGIIFV 531
Fly 532 LIAVIILSLVACFSKNRARYYTREDHLNGSES 563 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 3/22 (14%) |
leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 131..190 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 5/22 (23%) | ||
LRR_RI | 151..422 | CDD:238064 | 80/313 (26%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 178..262 | CDD:290566 | 26/92 (28%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 204..251 | CDD:275380 | 11/53 (21%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 274..334 | CDD:290566 | 20/81 (25%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 7/33 (21%) | ||
LRR_4 | 298..342 | CDD:289563 | 14/59 (24%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 8/27 (30%) | ||
Tlr2 | XP_006501523.1 | internalin_A | <58..>259 | CDD:380193 | 62/217 (29%) |
leucine-rich repeat | 65..87 | CDD:275378 | 9/21 (43%) | ||
LRR_8 | 87..145 | CDD:338972 | 21/57 (37%) | ||
leucine-rich repeat | 88..111 | CDD:275378 | 5/22 (23%) | ||
leucine-rich repeat | 112..135 | CDD:275378 | 8/22 (36%) | ||
leucine-rich repeat | 136..160 | CDD:275378 | 11/23 (48%) | ||
leucine-rich repeat | 186..212 | CDD:275380 | 6/25 (24%) | ||
leucine-rich repeat | 213..233 | CDD:275380 | 6/23 (26%) | ||
PRK15370 | <350..>568 | CDD:185268 | 40/218 (18%) | ||
leucine-rich repeat | 372..398 | CDD:275380 | 8/27 (30%) | ||
leucine-rich repeat | 399..424 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 448..468 | CDD:275380 | 4/19 (21%) | ||
leucine-rich repeat | 469..488 | CDD:275380 | 2/18 (11%) | ||
leucine-rich repeat | 489..510 | CDD:275380 | 3/20 (15%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 6/22 (27%) | ||
TPKR_C2 | 543..596 | CDD:387596 | 0/1 (0%) | ||
TIR | 650..794 | CDD:214587 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |