Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245160.1 | Gene: | waif2 / 100884149 | ZFINID: | ZDB-GENE-120209-3 | Length: | 313 | Species: | Danio rerio |
Alignment Length: | 355 | Identity: | 76/355 - (21%) |
---|---|---|---|
Similarity: | 127/355 - (35%) | Gaps: | 117/355 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 DKDEFR---DVKRLTKVL-LDGNQLSVVVDQLFRMQ----KSLNHLDLSYNRLAKVPNDSFLQLT 298
Fly 299 NLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLI 363
Fly 364 PQLTHLAIADMG-----TMPVGLLHPFKQLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLH 423
Fly 424 GISEDTVLRIQGIRNVRLDNNPLIC---------------DECHMGKLINVVRQLQWKWDTYPIC 473
Fly 474 FLPKSLRGAEINNLDINGLHTCLTFITDEEQNAASTSYNFLEHGGLNTLAILGGIIFVLIAVIIL 538
Fly 539 SLVACFSKNRARYYTREDHLNGSESKCLEK 568 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | |
leucine-rich repeat | 108..131 | CDD:275380 | |||
LRR_8 | 131..190 | CDD:290566 | |||
leucine-rich repeat | 132..155 | CDD:275380 | |||
LRR_RI | 151..422 | CDD:238064 | 46/192 (24%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | |||
LRR_8 | 178..262 | CDD:290566 | 8/23 (35%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | |||
leucine-rich repeat | 204..251 | CDD:275380 | 4/11 (36%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 6/27 (22%) | ||
LRR_8 | 274..334 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 6/22 (27%) | ||
LRR_4 | 298..342 | CDD:289563 | 13/43 (30%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 5/22 (23%) | ||
waif2 | NP_001245160.1 | LRRNT | 11..42 | CDD:214470 | 5/14 (36%) |
leucine-rich repeat | 42..68 | CDD:275380 | 5/25 (20%) | ||
LRR_RI | <68..156 | CDD:238064 | 25/105 (24%) | ||
LRR_8 | 68..126 | CDD:290566 | 21/75 (28%) | ||
leucine-rich repeat | 69..92 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 93..116 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 117..143 | CDD:275380 | 6/43 (14%) | ||
LRR_8 | 142..203 | CDD:290566 | 20/83 (24%) | ||
LRR_4 | 143..182 | CDD:289563 | 12/55 (22%) | ||
leucine-rich repeat | 144..166 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 167..190 | CDD:275380 | 8/38 (21%) | ||
TPKR_C2 | 201..246 | CDD:301599 | 9/58 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |