DRSC/TRiP Functional Genomics Resources

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Protein Alignment elfless and RNF125

DIOPT Version :9

Sequence 1:NP_001163003.1 Gene:elfless / 35076 FlyBaseID:FBgn0032660 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_060301.2 Gene:RNF125 / 54941 HGNCID:21150 Length:232 Species:Homo sapiens


Alignment Length:77 Identity:26/77 - (33%)
Similarity:44/77 - (57%) Gaps:5/77 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 MGHTESSDSNEDSPPNKRIKSDD--EESKKSVLPYNCPVCLEDVREKLPVSTNCGHVFCKACIKR 206
            ||...|:||.:.:|.:...::.:  .:.:..|..::|.||||.:.:  ||.|.||||||::||..
Human     1 MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQ--PVRTRCGHVFCRSCIAT 63

  Fly   207 AVDTGR-VCPLC 217
            ::...: .||.|
Human    64 SLKNNKWTCPYC 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elflessNP_001163003.1 RING 178..217 CDD:214546 18/39 (46%)
RNF125NP_060301.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 6/21 (29%)
RING-HC_RNF125 35..76 CDD:319456 19/43 (44%)
Interaction with the C2HC RNF-type zinc finger. /evidence=ECO:0000269|PubMed:27411375 43..45 0/1 (0%)
zf_C2HC_14 94..126 CDD:408358
Interaction with the RING-type zinc finger. /evidence=ECO:0000269|PubMed:27411375 109..113
Linker region. /evidence=ECO:0000269|PubMed:27411375 120..128
zf-Di19 141..>173 CDD:398954
Required for interaction with ubiquitin and for autoubiquitination. /evidence=ECO:0000269|PubMed:17990982 210..224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4347
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.860

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