DRSC/TRiP Functional Genomics Resources

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Protein Alignment btv and Dync1h1

DIOPT Version :9

Sequence 1:NP_001036369.3 Gene:btv / 35073 FlyBaseID:FBgn0023096 Length:4236 Species:Drosophila melanogaster
Sequence 2:NP_062099.3 Gene:Dync1h1 / 29489 RGDID:2511 Length:4644 Species:Rattus norvegicus


Alignment Length:4821 Identity:1138/4821 - (23%)
Similarity:2024/4821 - (41%) Gaps:891/4821 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QRTKFI---INTSVEY--------FSARLPGSELDEQTAMILEFLEQEELTVISAVHS------- 49
            :..:||   ||..:.|        |..|.|..:.|:..:..|..|...|.:....:||       
  Rat    92 EEKEFISYNINIDIHYGVKSNSLAFIKRAPVIDADKPVSSQLRVLTLSEDSPYETLHSFISNAVA 156

  Fly    50 -------RSDGRI---------RFHHRIPNEELCLLF----YKVPQVGHHRKEDGSEPLLGILTL 94
                   |..|:.         ....:|...|:.||.    .::|::        |.|:..|:| 
  Rat   157 PFFKSYIRESGKADRDGDKMAPSVEKKIAELEMGLLHLQQNIEIPEI--------SLPIHPIIT- 212

  Fly    95 EGGMVKSIYNSVSRVFSPSANSARRSEYGPEL----------SGI---------LENLHQNLGSS 140
              .:.|..|.        .....:.:::|.::          ||:         :..|.::    
  Rat   213 --NVAKQCYE--------RGEKPKVTDFGDKVEDPTFLNQLQSGVNRWIREIQKVTKLDRD---- 263

  Fly   141 LGLPQSGITSLRNEIKYWQQKLGQKSSSRLD--REAAQVF--IGVLEN---------------ME 186
               |.|| |:|: ||.:|...  :::..|:.  ||:.:|.  :.:|::               ::
  Rat   264 ---PASG-TALQ-EISFWLNL--ERALYRIQEKRESPEVLLTLDILKHGKRFHATVSFDTDTGLK 321

  Fly   187 KQISTIDGANP-----------SGT----IEEFLDHAHTNLDELWRLPYNYPQQRMADLLDIIGK 236
            :.:.|::..||           |.|    |.:.|....|:|.::...  .||.||...|::.|.:
  Rat   322 QALETVNDYNPLMKDFPLNDLLSATELDKIRQALVAIFTHLRKIRNT--KYPIQRALRLVEAISR 384

  Fly   237 RLLEVCLTQLLAEDVWSLNSSHVNNLMSQSIDTVDAW--------IQLCDSLTRLFWPNYVKHPW 293
            .|....|..|....:..:.......:|....:....|        :.|.|.:.|....| :|..|
  Rat   385 DLSSQLLKVLGTRKLMHVAYEEFEKVMVACFEVFQTWDDEYEKLQVLLRDIVKRKREEN-LKMVW 448

  Fly   294 -LGDSHVPKRGQQFKERLSEIRSIKQLYKQIATLL------EDTELQEMFQEQAP---------- 341
             :..:|     ::.:.||.::|..::.::|:..::      :.|.:.:..|.:||          
  Rat   449 RINPAH-----RKLQARLDQMRKFRRQHEQLRAVIVRVLRPQVTAVAQQNQGEAPEPQDMKVAEV 508

  Fly   342 ---------FTEFNI----------FDTSSLGQNKWHKALQHFEQVLQPIDERIAAALKRQLHNH 387
                     ..|.|:          .|.|..|...|..|::.:::.:..::.||.|.|:.|| ..
  Rat   509 LFDAADANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAAMKRYDERIDRVETRITARLRDQL-GT 572

  Fly   388 LSNPRQVIFIFSKYETLIQRP----AVLELLT--IER-EQFLQSLHILLQDLRKAMVDSNMEPDT 445
            ..|..::..|||::..|..||    |:.|..|  |:| :..::|||    |..|.....:.....
  Rat   573 AKNANEMFRIFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIESLH----DKFKVQYPQSQACKM 633

  Fly   446 GH---LSVICNECRWLKVVQHQIQEIEKVSHLISGR------EGFDKINKAVQEIKEETESL--- 498
            .|   |..:.....|.|.:..|:....|....:.|:      ||        |::|::.:|.   
  Rat   634 SHVRDLPPVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEG--------QKLKQDGDSFRMK 690

  Fly   499 LRTN--FEIW-----------SGQCSTAVKSGELRLRDDQAVVKFEKEGRQLMRVTFNPKLVTFC 550
            |.|.  |:.|           ||:..| ::|..:|.|... |:|        ::|.|.|:::|..
  Rat   691 LNTQEIFDDWARKVQQRNLGVSGRIFT-IESARVRGRSGN-VLK--------LKVNFLPEIITLS 745

  Fly   551 QDVREFENLGYNVPLELRAAATHAAKYMCYARRL-QQIATFHNTIGDRMIPCQRPIMLKNAL--- 611
            ::||..:.||:.|||.:...|..|.:...:|..| :.:.|:..|       |:: :..:|.:   
  Rat   746 KEVRNLKWLGFRVPLAIVNKAHQANQLYPFAISLIESVRTYERT-------CEK-VEERNTISLL 802

  Fly   612 ------ELQRLVQSETVA--WQD---ESSVQRYVDILQAAVSKLSSDNTLLVGYHEQAKRSVLKL 665
                  |:|.|: :|.:|  |:.   :..|||..:.:.....|:  |:.|::   |:.....::.
  Rat   803 VAGLKKEVQALI-AEGIALVWESYKLDPYVQRLAETVFNFQEKV--DDLLII---EEKIDLEVRS 861

  Fly   666 MSTDLFTQNQIWKDELRHLRELVATLERQGYTHLDAFKLHWDHQLYKVLEYQYILGL-------- 722
            :.|.:: .::.:.:.|..:::.|..|....|::|..:....|.::.::|..:...||        
  Rat   862 LETCMY-DHKTFSEILNRVQKAVDDLNLHSYSNLPIWVNKLDMEIERILGVRLQAGLRAWTQVLL 925

  Fly   723 --------LDMNNKLPDIHVK-------------LVLRQRELVFSPPEEEIR-ELY---FS---- 758
                    :||:...|.:..|             |.:..:.:..:||.||.| :||   |:    
  Rat   926 GQAEDKAEVDMDTDAPQVSHKPGGEPKIKNVVHELRITNQVIYLNPPIEECRYKLYQEMFAWKMI 990

  Fly   759 -------QLRRFIERPCNFHGLSEHSQELFKSMVTVNRHHFGPL-----YQRAAELFDKLQDFKT 811
                   |.:|:   ....|......::.:::.:|  |...||:     |.....:..:::.:..
  Rat   991 VLSLPRIQSQRY---QVGVHYELTEEEKFYRNALT--RMPDGPVALEESYSAVMGIVTEVEQYVK 1050

  Fly   812 IWLPWIALGCVDVDQLCGIHLNEAGDWDRNFRSCKHFSQQLAKLQQAEESID---------CIVI 867
            :||.:..|..:..:.:    .|..|:      ....:...|.::::|..:.|         .:||
  Rat  1051 VWLQYQCLWDMQAENI----YNRLGE------DLSKWQALLVQIRRARGTFDNAETKKEFGPVVI 1105

  Fly   868 NVLPLRSDIEYISRRYWESLANSLRTAILTDVSLIQEFLQSALQFLQNVPMDEGSISQ--SGMKY 930
            :...::|.:......:.:.:.:.....:.::::.....:..:.|.|:...:|..|.|.  :.:.|
  Rat  1106 DYGKVQSKVNLKYDSWHKEVLSKFGQMLGSNMTEFHSQISKSRQELEQHSVDTASTSDAVTFITY 1170

  Fly   931 -EKIMSKLPQIEKTLEAVRAKDSCLGGWCKER---------VTALSGILLQWEQLQPLLENHAVI 985
             :.:..|:.|.||.:|..|.....|.   |:|         :..:.|   :|.....::......
  Rat  1171 VQSLKRKIKQFEKQVELYRNGQRLLE---KQRFQFPPSWLYIDNIEG---EWGAFNDIMRRKDSA 1229

  Fly   986 LQRQVDMIKNQAETQLQNLKNEAEKFLLRWESTISELEANEHSTLDVFKERRLHWQQLQEKKTQL 1050
            :|:||..::.:...:.:.:::.....|..||.|       :..|.::..|..|....:.|.|...
  Rat  1230 IQQQVANLQMKIVQEDRAVESRTTDLLTDWEKT-------KPVTGNLRPEEALQALTIYEGKFGR 1287

  Fly  1051 L----EECSKFN--MEFPAEMLTPFTEIEEQMEKQSKQ-----WQVYDSFLTELQPVLHEEWAIY 1104
            |    |:|:|..  :|.....|...:|...|:..:..|     |........::..:..:.|...
  Rat  1288 LKDDREKCAKAKEALELTDTGLLSGSEERVQVALEELQDLKGVWSELSKVWEQIDQMKEQPWVSV 1352

  Fly  1105 RRRPYVLNEFIGKWEGSVHASIDLPSKRIRQ--QVEQLQSALP-------ILQQLQSESLSERHW 1160
            :.|....|     .:|.::...:.|: |:||  ..|.:|..|.       ::.:|:||:|.:|||
  Rat  1353 QPRKLRQN-----LDGLLNQLKNFPA-RLRQYASYEFVQRLLKGYMKINMLVIELKSEALKDRHW 1411

  Fly  1161 ARIFQLLNHKETKPLH-----SILLQDILQDFDVLQSAAQEISSIVRQASSEQIVRQALIEL-DQ 1219
            .::.        |.||     |.|....:.|.| ||.....:..::..|..|..:.:.|.:: :.
  Rat  1412 KQLM--------KRLHVNWVVSELTLGQIWDVD-LQKNEAIVKDVLLVAQGEMALEEFLKQIREV 1467

  Fly  1220 WSVTAQLKLITRTDASGQSVSLIKDYQEVLNKIGDNQSLLQSANNSAAFESFSDQAELWESRLNT 1284
            |: |.:|.|:...:    ...||:.:.::.||:.::.:.:.:...|..::.|.:.|..||.:||.
  Rat  1468 WN-TYELDLVNYQN----KCRLIRGWDDLFNKVKEHINSVSAMKLSPYYKVFEEDALSWEDKLNR 1527

  Fly  1285 LDALLSSLNHSQRRWVYLEPVF-GSGTLQH----EQALFKRIDKDFRFVMREIEMDPRVTSLTKI 1344
            :.||.......||||||||.:| ||..::|    |...|:.|..:|..:|:::...|.|..:..|
  Rat  1528 IMALFDVWIDVQRRWVYLEGIFTGSADIKHLLPVETQRFQSISTEFLALMKKVSKSPLVMDVLNI 1592

  Fly  1345 NNITTIVNALETQLARCQQNLMSYITDKRNSFPRFYFLGDDDLLELLGQASKDAEVIQRHIRKLF 1409
            ..:...:..|...|.:.|:.|..|:..:|:|||||||:||:||||::|. ||:...:|:|.:|:|
  Rat  1593 QGVQRSLERLADLLGKIQKALGEYLERERSSFPRFYFVGDEDLLEIIGN-SKNVAKLQKHFKKMF 1656

  Fly  1410 PGCHSLSIRQVGPNPATSSDVNQYSITSVHSAEGDELKLSQPVEM--KGDIERWLNQLVTVVQDT 1472
            .|..|:.:.:       .|.|    :..:.|.||:|:....||.:  ...|..||..:...::.|
  Rat  1657 AGVSSIILNE-------DSSV----VLGISSREGEEVMFKTPVSITEHPKINEWLTLVEKEMRVT 1710

  Fly  1473 LRDQIYECYTGTT--GGSDNLDEKI----LKKYASQVLATARALHFTRQAEQAI----GSMSLGK 1527
            |...:.|..|...  |.:.::|...    :.||.:|::..:..:.::...|.|:    |...:|.
  Rat  1711 LAKLLAESVTEVEIFGKATSIDPNTYITWIDKYQAQLVVLSAQIAWSENVENALSNVGGGGDVGP 1775

  Fly  1528 LKQQLKD-EIT-HLAALKNKSENGTLISLKLRALLLDLVHYSGVTEQLQKHNVVHTSDWHWLCQL 1590
            |:..|.: |:| ::.|.....|...|...||..|:.:|||...||..|.|..:.:...:.||.|:
  Rat  1776 LQSVLSNVEVTLNVLADSVLMEQPPLRRRKLEHLITELVHQRDVTRSLIKSKIDNAKSFEWLSQM 1840

  Fly  1591 RYYLGKKGGTSGEVNANRQVCVRMVYAEFEYAYEFLGQASKLVHTRLTHRCYLILTQAMHMGLGG 1655
            |:|...|     :.:..:|:.::|..|:|.|.:|:||...|||.|.||.||||.:|||:...|||
  Rat  1841 RFYFDPK-----QTDVLQQLSIQMANAKFNYGFEYLGVQDKLVQTPLTDRCYLTMTQALEARLGG 1900

  Fly  1656 NPFGPAGTGKTECVKALGAMLGRLVLVFNCDENVDTESMSLILTGLARCGAWGCFDEFNRLQEAT 1720
            :|||||||||||.|||||..|||.||||||||..|.::|..|..||.:.||||||||||||:|..
  Rat  1901 SPFGPAGTGKTESVKALGHQLGRFVLVFNCDETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERM 1965

  Fly  1721 LSSISMLIQPIQSALKERAN----------SVQIGERQIQLNQHCGIFVTLNPAGAEYGGRQKLP 1775
            ||::|..:|.||.||:|.:|          :.::..:|::::....||:|:||.   |.||..||
  Rat  1966 LSAVSQQVQCIQEALREHSNPNYDKTSAPITCELLNKQVKVSPDMAIFITMNPG---YAGRSNLP 2027

  Fly  1776 GNIQALFRPIVMQQPEPGEIARVMLFVEGFTEASAIASRIVELFELSGKMLSAQRHYDWGLRELK 1840
            .|::.|||.:.|.:|:...||:|||:.:||..|..:|::||..|:|..:.||:|.|||:|||.||
  Rat  2028 DNLKKLFRSLAMTKPDRQLIAQVMLYSQGFRTAEVLANKIVPFFKLCDEQLSSQSHYDFGLRALK 2092

  Fly  1841 TVLMVCGEGLRDQL-----------TSEDNNQSSANF-EMSVVVRCLRSSTMSKLAPHDVNRFEM 1893
            :||:..|...|:::           .:.|..:.:.|. |..::::.:..:.:.||...|:.....
  Rat  2093 SVLVSAGNVKRERIQKIKREKEERGEAVDEGEIAENLPEQEILIQSVCETMVPKLVAEDIPLLFS 2157

  Fly  1894 LLRNVFPEIGSSPAPETQLHQSLSAAFAQLGLCRSERQ------IEKALQLHEQLQKRMGVVLVG 1952
            ||.:|||.:.......|.|.:.|.....::.|...:.:      :||.|||::..|...|:::||
  Rat  2158 LLSDVFPGVQYHRGEMTALREELKKVCQEMYLTYGDGEEVGGMWVEKVLQLYQITQINHGLMMVG 2222

  Fly  1953 PPGCGKSTIISLLKQA---LCGTQLKVHTISPKSMSRIQLLGRLDADTRQWQDGVLTHTAVAVNQ 2014
            |.|.|||....:|.:|   |.|.:...|.|.||::|:..|.|.||.:||:|.||:.||....:..
  Rat  2223 PSGSGKSMAWRVLLKALERLEGVEGVAHIIDPKAISKDHLYGTLDPNTREWTDGLFTHVLRKIID 2287

  Fly  2015 E---SSQVHSWIVCDGSIDPEWIEALNSVLDDNKLLTLPSGWRIQFGSNVNFIFETDDVRHASPA 2076
            .   ..|...|||.||.:||||:|.||||||||||||||:|.|:....||..:||..|:::|:.|
  Rat  2288 NVRGELQKRQWIVFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRIMFEVQDLKYATLA 2352

  Fly  2077 TISRMGIVNMSYDYYPADGILKHELS--------------------KEPYGD------------- 2108
            |:||.|:|..|.|....|.|..:.|:                    ||..|:             
  Rat  2353 TVSRCGMVWFSEDVLSTDMIFNNFLARLRSIPLDEGEDEAQRRRKGKEDEGEEAASPMLQIQRDA 2417

  Fly  2109 --LLQSYVDGNFQYAVNWIESQLLLTHLPGINRAHLLRSLLLQLH-GTQSLEEYGA--------- 2161
              ::|.|...| ......:|....|.|:..:.|...|.||...|| ..:::.:|.|         
  Rat  2418 ATIMQPYFTSN-GLVTKALEHAFKLEHIMDLTRLRCLGSLFSMLHQACRNVAQYNANHPDFPMQI 2481

  Fly  2162 -------------ATLRALFGYMPNDRQREFAQLILKHANLYVANPNYAELTHYE---SSRNSLE 2210
                         |.|.:|.|......:.|..:.|.:...:.:.......:..||   |...|..
  Rat  2482 EQLERYIQRYLVYAILWSLSGDSRLKMRAELGEYIRRITTVPLPTAPNIPIIDYEVSISGEWSPW 2546

  Fly  2211 QYAVDAIETPEKGSQLIITSYMKSYLDIL--ETLLKTQGTRLPPFMLIGPSGSGKTLLLQRAVLE 2273
            |..|..||.  :..::.....:...||.:  |.||.|......|.:|.||.|||||:.|..|:..
  Rat  2547 QAKVPQIEV--ETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALRA 2609

  Fly  2274 NSGYQLATINCSTQLTPRYILHTLKTHCVTVSGIKGREYR---------PKQAR--LVLFMKNLD 2327
            ....::..:|.|:..||..:|.|...:|         |||         |.|..  ||||...::
  Rat  2610 LPDMEVVGLNFSSATTPELLLKTFDHYC---------EYRRTPNGVVLAPVQLGKWLVLFCDEIN 2665

  Fly  2328 LCQQDSWGACEVVELLFQLAQRGGFY-AENLEWIGVSGLQLCASIGGNT--GK--IAPRYFAINQ 2387
            |...|.:|...|:..:.|:.:.|||| ..:..|:.:..:|...:....|  |:  ::.|:.....
  Rat  2666 LPDMDKYGTQRVISFIRQMVEHGGFYRTSDQTWVKLERIQFVGACNPPTDPGRKPLSHRFLRHVP 2730

  Fly  2388 FVRVSRPTSQDMLEI------VQRRLEPLLEEHFRGSENRGRSGVNLQHVSESLMDCFEKLQATF 2446
            .|.|..|....:.:|      ...||.|.|..:             .:.::.::::.:...|..|
  Rat  2731 VVYVDYPGPASLTQIYGTFNRAMLRLIPSLRTY-------------AEPLTAAMVEFYTMSQERF 2782

  Fly  2447 TNVGGRQAHYQFSP-------KCIMKLLDALVFYPASDFNEALYCELLGMFRDRLISEEHVQQFE 2504
            |.  ..|.||.:||       :.|.:.|..|...|..........|.|.:|:|||:.:|..:..:
  Rat  2783 TQ--DTQPHYIYSPREMTRWVRGIFEALRPLETLPVEGLIRIWAHEALRLFQDRLVEDEERRWTD 2845

  Fly  2505 GILKQTMRKYYGKEKVFFVPKSPKSRGHLHCLTHDEWMEE-------------VQRQVTICNTEN 2556
            ..:.....|::        |...|.:.....:.:..|:.:             |:.::.:...|.
  Rat  2846 ENIDMVALKHF--------PNIDKEKAMSRPILYSNWLSKDYIPVDQEELRDYVKARLKVFYEEE 2902

  Fly  2557 YSITAPITEELLSHVARITRVLSRTDAHMLILGQSGGRHLDAIFTAATFQEAKVVTLQGGPSYDL 2621
            ..:...:..|:|.||.||.|:..:...|:|::|.||..........|......|..::....|..
  Rat  2903 LDVPLVLFNEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVAWMNGLSVYQIKVHRKYTG 2967

  Fly  2622 TDFYNDLKVAMQTAALEQQMSYLLIEQCWLSYVPD--ILKPIEALLEGSEILELF-GDDLETVAS 2683
            .||..||:..::.:..:.:....::::   |.|.|  .|:.:..||...|:..|| ||:..|:.:
  Rat  2968 EDFDEDLRTVLRRSGCKNEKIAFIMDE---SNVLDSGFLERMNTLLANGEVPGLFEGDEYATLMT 3029

  Fly  2684 TLKQAAQLEGY----QESMGTYFLKRARDYLHIIIVLDPNSAKVQDYFNNFPALHRQMDLLYVRG 2744
            ..|:.||.||.    .|.:..:|..:....||::..::|:|..::|.....|||..:..|.:...
  Rat  3030 QCKEGAQKEGLMLDSHEELYKWFTSQVIRNLHVVFTMNPSSEGLKDRAATSPALFNRCVLNWFGD 3094

  Fly  2745 ESRETIAILPKQF-----IELLNESIAGGGSGRGKVPTCSHFADISDELPSEE------------ 2792
            .|.|.:..:.|:|     :|..|..:.            .:...:.|:||...            
  Rat  3095 WSTEALYQVGKEFTSKMDLEKPNYIVP------------DYMPVVYDKLPQPPTHREAIVNSCVF 3147

  Fly  2793 ----------------------TSQRYYQLIRTYFHMYNNAANEIDQRLGKLQMGVDKLASAHAL 2835
                                  |.:.|...|..|.::::...:|::::...|.:|:.|:......
  Rat  3148 VHQTLHQANARLAKRGGRTMAITPRHYLDFINHYANLFHEKRSELEEQQMHLNVGLRKIKETVDQ 3212

  Fly  2836 VDTLKSNAAAQEQALGEKRQLANEALEMISFTMRNANEQKSSMLELKQQTQKSSEQLKIRQKEIQ 2900
            |:.|:.:...:.|.|..|...||:.|:.:....:.|.::|....|:::|..|..|.:..:|..::
  Rat  3213 VEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVK 3277

  Fly  2901 QELAEVEPILAEASNAVGQIKSEALSEIRSLRAPPEAVRDILEGVLRLMGIRDTSWNSMKTFLAK 2965
            ::|.:|||.:.||.|||..||.:.|.|:||:..||.||:..||.:..|:|...|.|..:::.:.:
  Rat  3278 EDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSIIMR 3342

  Fly  2966 RGVKEDIRSLDPARISPENCEAVERLLLAKGDSYEAKNAKRASAAAAPLAAWVQASVRYSRVIQS 3030
            ......|.:.....||....|.:::..:: ..||..:...|||.|..|:..|..|.:.|:.:::.
  Rat  3343 ENFIPTIVNFSAEEISDAIREKMKKNYMS-NPSYNYEIVNRASLACGPMVKWAIAQLNYADMLKR 3406

  Fly  3031 IKPLEREQNELQKNLNAAEDEMQELASGLDDVDKRVKQLSAKLQTYTQEAAVLELKLQEASGTLQ 3095
            ::||   :|||||..:.|:|..|:    .::|::.::.|.|.:..|.:|.|||..:.|.....|.
  Rat  3407 VEPL---RNELQKLEDDAKDNQQK----ANEVEQMIRDLEASIARYKEEYAVLISEAQAIKADLA 3464

  Fly  3096 AAE-------LLVEKLSAEYTTWSLQLTELKKAHKTLDAKTLLIAIAINYCAGLGLEQRCS---- 3149
            |.|       .|::.||||...|.......|....|:....||.|..|.|......:.|.:    
  Rat  3465 AVEAKVNRSTALLKSLSAERERWEKTSETFKNQMSTIAGDCLLSAAFIAYAGYFDQQMRQNLFTT 3529

  Fly  3150 -SLKRLAADFHLPSDFDLRGSLLTEQQQIIWESQGLARDAQIIESAALLREMLSLPYGACPIPLL 3213
             |.....|:....:|......|....:::.|::..|..|....|:|.:|:....       .||:
  Rat  3530 WSHHLQQANIQFRTDIARTEYLSNADERLRWQASSLPADDLCTENAIMLKRFNR-------YPLI 3587

  Fly  3214 LDPTQTAAAWLMAHLKGSGRPCELTTHGNDRLPYQLELAVRFGKTLLVTDCEQLRPPVLQLLQGH 3278
            :||:..|..::|...|  .|....|:..:|.....||.|:|||..|||.|.|...|.:..:|...
  Rat  3588 IDPSGQATEFIMNEYK--DRKITRTSFLDDAFRKNLESALRFGNPLLVQDVESYDPVLNPVLNRE 3650

  Fly  3279 VFVRFNKRQLAIGSKLVDLHESFQLVLISKSHRLDLPEEQRSQLNVLKFTVTAAGLADQLMSKAI 3343
            |.....:..:.:|.:.:||..||.:.|.::...::.|.:..|::..:.||||.:.|..|.:::.:
  Rat  3651 VRRTGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDLCSRVTFVNFTVTRSSLQSQCLNEVL 3715

  Fly  3344 VLKNGELEQQRIELLQKEGHLLKQRMEMQDKLLEQLSKSEGDILKNEQLLESLNEIKQGSTQIDE 3408
            ..:..:::::|.:||:.:|....:..:::..||:.|::.:|.||.::.::.:|..:|:.:.::..
  Rat  3716 KAERPDVDEKRSDLLKLQGEFQLRLRQLEKSLLQALNEVKGRILDDDTIITTLENLKREAAEVTR 3780

  Fly  3409 ALKQSG---QIRDTLLAQFGSLRELSSRAATFY---AGLIQG---YELSPLVYIELF-------- 3456
            .::::.   |..:|:..|:   ..||:..::.|   ..|.|.   |:.|...:::::        
  Rat  3781 KVEETDIVMQEVETVSQQY---LPLSTACSSIYFTMESLKQVHFLYQYSLQFFLDIYHNVLYENP 3842

  Fly  3457 --LGALSKSQRDESKVYDCLVRSVYMNLARATSRDSQLSLSLWVCHQAYPDRLNPKEWELFVNNF 3519
              .||...:|| .|.:...|.:..:..:||.......::.::.:........:....::....:|
  Rat  3843 NLKGATDHTQR-LSVITKDLFQVAFNRVARGMLHQDHITFAMLLARIKLKGTMGEPTYDAEFQHF 3906

  Fly  3520 MGSSDGSMVLSQLGKLPDCM-----PKEAQLKLAMLLQLFPDLRSKLQLEKDY-IWRGFIEAQA- 3577
            :   .|..::...|..|...     ..||..:|: .|..|.||.:|:|.::.: ||   :|:.: 
  Rat  3907 L---RGKEIVLSAGSTPKVQGLTVEQAEAVARLS-CLPAFKDLIAKVQADEQFGIW---LESSSP 3964

  Fly  3578 DDVLPAL----------GSSFQRVLIAQIFRPDLMLHQLRKVSSDLLGISPDASTQPSVEQLLQ- 3631
            :..:|.|          |.:..|:|:.|.||||.:|.......|..||    .|....:||.|. 
  Rat  3965 EQTVPYLWTEETPATPIGQAIHRLLLIQAFRPDRLLAMAHMFVSTNLG----ESFMSIMEQPLDL 4025

  Fly  3632 ------QSSCDRPILMVS--------HAENDPTTELRKWANQKYREMAIGKG-----VEKRVLSE 3677
                  :...:.|:||.|        |.|     :|....|.:...:|||..     .:|.:   
  Rat  4026 THIVGTEVKPNTPVLMCSVPGYDASGHVE-----DLAAEQNTQITSIAIGSAEGFNQADKAI--- 4082

  Fly  3678 MRQAAIDGHWLCVKNVHLVPEFLTQMERELSEIQKSKDFRLWLLCESTEGFSEAAIYKCLKVRYE 3742
             ..|...|.|:.:|||||.|.:|.|:|::|..:|....|||:|..|.........:.......:|
  Rat  4083 -NTAVKSGRWVMLKNVHLAPGWLMQLEKKLHSLQPHACFRLFLTMEINPKVPVNLLRAGRIFVFE 4146

  Fly  3743 QPKGLKQIVMRLLQNFAAEQDQKLKNQPKSLKMRLVYFVLTAVLQQRRQFIPQGWSKYYEFGEAD 3807
            .|.|:|..::|...:....:..|..|:...|...|.:|  .||:|:|.::.|.||||.|||||:|
  Rat  4147 PPPGVKANMLRTFSSIPVSRMCKSPNERARLYFLLAWF--HAVIQERLRYAPLGWSKKYEFGESD 4209

  Fly  3808 LKAALGIL-RMMD------QQLNSGKCDWLLMQRLSEALAYGGRVNNQRDLEILTTYLNQF---- 3861
            |::|...: ..:|      |.::..|..|..::.|.....|||||:|:.|..:|.|:|.:.    
  Rat  4210 LRSACDTVDTWLDDTAKGRQNISPDKIPWSALKTLMAQSIYGGRVDNEFDQRLLNTFLERLFTTR 4274

  Fly  3862 ---------CSADVLSNRWSPLGLSLSIPTSGQLQDYYAALEKLPDTDEPSMYGLANQAQQQREI 3917
                     |..|...:        :.:|...:.:::...:|.|||...||..||.|.|::....
  Rat  4275 SFDSEFKLACKVDGHKD--------IQMPDGIRREEFVQWVELLPDAQTPSWLGLPNNAERVLLT 4331

  Fly  3918 EQAKRVIKELRGLHYGRGLAKDSGGAG----ESKGNDQLT--GRQKLEQQIKPLLNLWRKLAASC 3976
            .|...:|.::..:.    :.:|.....    |.|.....|  ||....:.:....:.|..|    
  Rat  4332 TQGVDMISKMLKMQ----MLEDEDDLAYAETEKKTRTDSTSDGRPAWMRTLHTTASNWLHL---- 4388

  Fly  3977 TIIQTMKEAKTDVG--ESPWALFVLAELKLGADLYGIVHQTLSQMHAWLKESQEVDGSTLRTLAE 4039
             |.||:...|..|.  :.|...|...|:|:||.|...|.|.|:.: ..:.|.::...:.||||..
  Rat  4389 -IPQTLSPLKRTVENIKDPLFRFFEREVKMGAKLLQDVRQDLADV-VQVCEGKKKQTNYLRTLIN 4451

  Fly  4040 QQI----PASWLKLWPGPGSNSAVDFLRALIVRAQAAELRFREQMHLDFVEDINFVQVFN----- 4095
            :.:    |.|| ..:..|...:.:.::.                   ||.|.|..:|..:     
  Rat  4452 ELVKGILPRSW-SHYTVPAGMTVIQWVS-------------------DFSERIKQLQNISQAAAA 4496

  Fly  4096 -----CENLLSCLKLLQSRKLAVSTERLELQTCGSSNLE----------SDSSDI---ILKLAPL 4142
                 .:|:..||..|...:..::..|..:....|.:||          |.|:.:   ...:..|
  Rat  4497 GGAKELKNIHVCLGGLFVPEAYITATRQYVAQANSWSLEELCLEVNVTASQSTTLDACSFGVTGL 4561

  Fly  4143 KIDGAQSGMGKSNPFYIKYKIKDEVQNVSHTTTSSSKYGKNSLYSTQNAESKPKLPLYSRSSRDK 4207
            |:.||..    ||.   |..:.:.:..|...|  ..::||.:  |.:...|...||:|...:|..
  Rat  4562 KLQGATC----SNN---KLSLSNAISTVLPLT--QLRWGKQT--SAEKKASVVTLPVYLNFTRAD 4615

  Fly  4208 LICHLNVDIVT 4218
            ||..::.:|.|
  Rat  4616 LIFTVDFEIAT 4626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btvNP_001036369.3 DHC_N1 200..618 CDD:285571 107/507 (21%)
DHC_N2 1072..1481 CDD:285579 112/435 (26%)
P-loop_NTPase 1621..1847 CDD:304359 118/235 (50%)
P-loop_NTPase 1919..>1967 CDD:304359 16/53 (30%)
P-loop_NTPase 1947..2081 CDD:304359 64/139 (46%)
P-loop_NTPase 2565..>2733 CDD:304359 44/174 (25%)
MT 2821..3138 CDD:289543 91/323 (28%)
AAA_9 3179..3401 CDD:289547 55/221 (25%)
Dynein_heavy 3536..>4051 CDD:281078 150/583 (26%)
Dync1h1NP_062099.3 Stem. /evidence=ECO:0000250 2..1865 391/1913 (20%)
DHC_N1 238..830 CDD:285571 130/642 (20%)
Interaction with DYNC1I2. /evidence=ECO:0000269|PubMed:10893223 446..701 55/272 (20%)
Interaction with DYNC1LI2. /evidence=ECO:0000269|PubMed:10893223 649..800 40/176 (23%)
DYN1 1044..4327 CDD:227570 872/3446 (25%)
DHC_N2 1321..1719 CDD:285579 111/429 (26%)
P-loop_NTPase 1866..2103 CDD:304359 119/239 (50%)
AAA 1. /evidence=ECO:0000250 1866..2097 118/233 (51%)
AAA 2. /evidence=ECO:0000250 2178..2450 89/272 (33%)
P-loop_NTPase 2217..2357 CDD:304359 64/139 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2389..2409 3/19 (16%)
AAA 3. /evidence=ECO:0000250 2554..2803 64/274 (23%)
P-loop_NTPase 2565..2826 CDD:304359 67/284 (24%)
AAA 4. /evidence=ECO:0000250 2897..3166 57/283 (20%)
P-loop_NTPase 2907..3185 CDD:304359 60/292 (21%)
Stalk. /evidence=ECO:0000250 3187..3498 87/318 (27%)
MT 3199..3530 CDD:289543 93/338 (28%)
AAA 5. /evidence=ECO:0000250 3551..3780 57/237 (24%)
AAA_9 3559..3774 CDD:289547 56/223 (25%)
Dynein_heavy 3920..4630 CDD:281078 187/775 (24%)
AAA 6. /evidence=ECO:0000250 4003..4219 65/230 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D26380at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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