DRSC/TRiP Functional Genomics Resources

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Protein Alignment btv and Dnah6

DIOPT Version :9

Sequence 1:NP_001036369.3 Gene:btv / 35073 FlyBaseID:FBgn0023096 Length:4236 Species:Drosophila melanogaster
Sequence 2:XP_038964640.1 Gene:Dnah6 / 117250 RGDID:621797 Length:4156 Species:Rattus norvegicus


Alignment Length:4190 Identity:986/4190 - (23%)
Similarity:1759/4190 - (41%) Gaps:712/4190 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 KHPWLGDSHVPKRGQQFKERLSEIRSIKQLYKQIATLLEDTELQEM---FQEQAPFTEFNIFDTS 351
            :|.........||.|..|.....:..:.|.:||...:.|....|.|   ..:.:|    ::.:.|
  Rat    67 RHTTKAQEKTRKRQQPVKLEPLPVLKLYQDHKQPEYIYEQNRQQLMSTGILKPSP----SMIERS 127

  Fly   352 SLGQNKWHKALQHFEQVLQPIDERIAAALKRQLHNHLSNPRQVIF-----IFSKYETLIQRPAV- 410
            |:|..:..:||:. :|||:|..:..:.:..:.....:.  |:.:|     .:.|| |...|..| 
  Rat   128 SIGSLEAQEALKR-KQVLRPSADVFSLSPSKLPRTSIG--RRGLFGMRSSTYPKY-TFNDREEVV 188

  Fly   411 -------LELLTIERE-QFLQSLHILLQDLRKAMVDSNMEPDTGHLSVICNECRWLKVVQHQIQE 467
                   |:::.|..| :.|..|:::     .|:..|::|.||.:|.|:..|    .:.::....
  Rat   189 KANIRDPLQIIKIVHENEHLGFLYMI-----PAVPKSSIEYDTYNLKVVSYE----NINKNDYYT 244

  Fly   468 IEK--VSHLISGREGFDKINKAVQEI---KEETE----SLLR--TNFEIWSGQ--------CSTA 513
            |.|  |:|:.:....:.:..:..||.   :|.|:    ||.|  ..|.:|...        |..|
  Rat   245 ISKDAVTHVFNDDIEYIETERWEQEYLYHRELTKIPIFSLFRKWKAFSVWRKNVRSKKITGCRKA 309

  Fly   514 VKSG------ELRLRDDQAVVKFEKEGRQL--MRVTFNPKLVTFCQDVREF------------EN 558
            ::..      .||    .|::|......||  |.:.:..|..|:  .::||            |.
  Rat   310 LRKNLFIVNPYLR----PALLKINDMCYQLSFMGLCYIEKFHTY--TLQEFKAAQVVRVQEVTER 368

  Fly   559 LGY-----------NVPLELRAAA---------THAAKYMCYARRLQQIATFHNTIGDRMIPCQR 603
            |.|           :....||||.         ||...:..      .||:|.:...|       
  Rat   369 LEYFRFEAKDVVRKSCRFALRAAGFIPDDCEVETHEDYFKI------NIASFIDAPSD------- 420

  Fly   604 PIMLKNALELQRLVQSETVAWQDESSVQRYVDILQAAVSKLSS---DNTL----------LVGY- 654
                     |....:||.:.:.:::|.:.:...|...: :|:.   .|||          |:.| 
  Rat   421 ---------LPTYGESEKMTYTEQASKRHHCMRLTCFI-RLNDYLIQNTLHVLTVNTASSLLNYL 475

  Fly   655 HEQAKRSVLKLMSTDLFTQNQIWKDELRHLRELVATLERQGYTHLDAFKLHWDHQLYKVLEYQYI 719
            .::.||:    .|.|:.   |.|..|     :....:|::|...::  |...|..|         
  Rat   476 SDKLKRT----PSADVI---QKWITE-----DKPEVIEKKGAPMME--KQEEDESL--------- 517

  Fly   720 LGLLDMNNKLPDIHVKLVLRQRELVFSPPEEE----------------------IRELYFSQL-- 760
                     :|....:|:|..:.|:|.|..|:                      :.:.||:..  
  Rat   518 ---------IPMFLTELILTVQSLLFEPSLEDFLDGISGIINHFENTVLSVPNLVPDSYFNAFTS 573

  Fly   761 ----RRFIERPC--------------NFHGLSEHSQELFKSMVTVNRHHFGPLYQRAAELFDKLQ 807
                ::..|:.|              ||..:.:..:|...|.....|     ||   |..|:|.|
  Rat   574 PFINKKVEEKTCGPGPSLSAVFEDDRNFLTIIQQIKETIHSAFDSAR-----LY---AATFEKFQ 630

  Fly   808 DFKTIWLPWIALGCVDVDQLCGIHLNEAGDWD---RNFRSCKHFSQQLAKLQQAEESIDCIVI-- 867
            .|                    ...||:.|.:   ......:.||.||.|..:..:  |.:.:  
  Rat   631 IF--------------------FKENESLDLEALKEEEPDVEFFSSQLEKYHKQHK--DSVALKP 673

  Fly   868 --NVLPLRSDIEYISRRYWESLANSLRTAILTDVSLIQEFLQSALQFLQNVPMDEGSISQSGMKY 930
              ||..|..|.:.:..:...|....|....|....|.::.:.:.:...|:.......:..:.::|
  Rat   674 TRNVGLLLIDTKQLKEKLIPSPLRCLEVLNLMLPRLSKKKVDAIISEAQDAEYKLEFVPTTTIEY 738

  Fly   931 EKIMSKLPQIEKTLEAVRAKDSCLGGWCKERVTALSGILLQWEQLQPLLENHAVI--LQRQVDMI 993
            ...:..|.:|::.:|.:..:.:        .|..:..::.|::.|.| .|:.||.  ::..:..:
  Rat   739 VNSLVFLDEIQERIETLEEEGN--------TVVQMYKLIEQYQVLTP-PEDFAVFATMKPSITAV 794

  Fly   994 KNQAE------------------TQLQNLKNEA-EKFLLRWESTISELEANEHSTLDVFKERRLH 1039
            :|..:                  ..|::|.||. |..||..:..|.::.|:......:..:.:..
  Rat   795 RNAIDKSVGDRESSIKQFCLHLGRDLEDLNNEVNEVKLLAQDPQILDISADPEKIKTMLSDLQSV 859

  Fly  1040 WQQLQEKKTQLLEECSKFNMEFPAEMLTPFTEIEEQMEKQSKQWQVYDSFLTELQPVLHEEWAIY 1104
            ...||::..|.......|.:|     ::.|..:||...:...:..::|| |:|... |.:||...
  Rat   860 LDDLQKRAFQYKSYQKNFKVE-----VSKFDALEEVCAELRLKQLLWDS-LSEWDK-LQQEWLKS 917

  Fly  1105 R---RRPYVLN-------EFIGKWEGSVHASIDLPSKRIRQQVEQLQSALPILQQLQSESLSERH 1159
            :   ..|.|||       :|:.:.|..:..:..:|  :::|:||:::..||::..|::.:|..||
  Rat   918 KFDCLDPEVLNGQVTKYAKFVTQLEKGLPPNSVVP--QLKQKVERMKEKLPVINDLRNPTLKPRH 980

  Fly  1160 WARIFQLLNHKETKPLHSILLQDI-----------LQDFDVLQSAAQEISSIVRQASSEQIVRQA 1213
            |:.|.|.::         .||.||           |..||.    ||||..|..|||.|..:...
  Rat   981 WSAIEQTVD---------ALLVDIEIPLTLERLSELHVFDF----AQEIQDISGQASGEAALEII 1032

  Fly  1214 LIEL-DQWSVTAQLKLITRTDASGQSVSLIKDYQEVLNKIGDNQSLL-QSANNSAAFES------ 1270
            |.:: |.|. |.:..::...|:        ||. .:|....|.|.|| .|..|.|...|      
  Rat  1033 LKKVEDSWK-TTEFVILPHRDS--------KDV-FILGGTDDIQVLLDDSTINVATIASSRYVGP 1087

  Fly  1271 FSDQAELWESRLNTLDALLSSLNHSQRRWVYLEPVFGSGTLQH----EQALFKRIDKDFRFVMRE 1331
            ...:.:.|:.:|:..:..|....:.||.|:|||.:|.:..:|.    |..:|.::||.::.:||:
  Rat  1088 LKTRVDDWQKQLSLFNQTLEEWLNCQRNWLYLESIFNAPDIQRQLPAEAKMFLQVDKSWKEIMRK 1152

  Fly  1332 IEMDPR-VTSLTKINNITTIV--NALETQLARCQQNLMSYITDKRNSFPRFYFLGDDDLLELLGQ 1393
            :...|. :.:.|:...:.|..  |||..|:.:|   |.:|:..||..|||||||.:|:|||:|.|
  Rat  1153 VNRLPNALRAATQPGLLETFQNNNALLDQIQKC---LEAYLESKRVIFPRFYFLSNDELLEILAQ 1214

  Fly  1394 ASKDAEVIQRHIRKLFPGCHSLSIRQVGPN----PATSSD---VNQYSITSVHSAEGDELKLSQP 1451
             :::.:.:|.|:||.|.....|....:.|.    |...::   |....|.::.|.||:.:.|.:.
  Rat  1215 -TRNPQAVQPHLRKCFDSISKLEFALMPPTEGKIPGIDTEPEKVFTNDILAMLSPEGERVGLGKG 1278

  Fly  1452 VEMKGDIERWLNQLVTVVQDTLRDQIYECYTGTTGGSDNL-DEKILKKYASQVLATARALHFTRQ 1515
            ::.:|::|.||.::...:..:||..   |..........| .|.::..:.|||:.|...:.:.|.
  Rat  1279 LKARGNVEEWLGKVEEAMFSSLRRL---CKAAIADYQGKLRTEWVIAGHPSQVILTISQIMWCRD 1340

  Fly  1516 AEQAIGSMSLGKLKQQLKDEITHLAALKNKSE-------------NGTLISLK---LRALLLDLV 1564
                        |.:.|:.|..||.||:...:             .|:|..|.   :.||:...|
  Rat  1341 ------------LTESLECEDNHLEALEKFEQVNFERLNALAAIVRGSLPKLHRNIITALITIDV 1393

  Fly  1565 HYSGVTEQLQKHNVVHTSDWHWLCQLRYYLGKKGGTSGEVNANRQVCV-RMVYAEFEYAYEFLGQ 1628
            |...:..:|.:..|.....:.|..|||||        .:|:.:.  || ||..:::.||||:||.
  Rat  1394 HARDIVSELVQSKVDSAESFDWQRQLRYY--------WDVDLDN--CVARMALSQYTYAYEYLGA 1448

  Fly  1629 ASKLVHTRLTHRCYLILTQAMHMGLGGNPFGPAGTGKTECVKALGAMLGRLVLVFNCDENVDTES 1693
            ..:||.|.||.||||.|..|:.:.|||.|.|||||||||..|.|...|....:||||.:.:|.:.
  Rat  1449 CPRLVITPLTDRCYLCLMGALQLDLGGAPAGPAGTGKTETTKDLAKALAIQCVVFNCSDGLDYKM 1513

  Fly  1694 MSLILTGLARCGAWGCFDEFNRLQEATLSSISMLIQPIQSALKERANSVQIGERQIQLNQHCGIF 1758
            |....:|||:.|||.|||||||:....||.|:..:..|::|...:.:......|:|:|...|..|
  Rat  1514 MGRFFSGLAQSGAWCCFDEFNRIDIEVLSVIAQQLITIRNAKAAKLSRFMFEGREIKLVMTCAAF 1578

  Fly  1759 VTLNPAGAEYGGRQKLPGNIQALFRPIVMQQPEPGEIARVMLFVEGFTEASAIASRIVELFELSG 1823
            :|:||.   |.||.:||.|::|||||:.|..|....||.|:|:.|||..:..:|.::.::::|..
  Rat  1579 ITMNPG---YAGRTELPDNLKALFRPMAMMVPNYALIAEVILYSEGFESSKILARKMTQMYKLCS 1640

  Fly  1824 KMLSAQRHYDWGLRELKTVLMVCGEGLRDQLTSEDNNQSSANFEMSVVVRCLRSSTMSKLAPHDV 1888
            :.||.|.|||:|:|.:|:||::.|     .|..|:.:.|    |..|::|.||.|.:.|....|.
  Rat  1641 EQLSQQDHYDFGMRAVKSVLVMAG-----SLKRENPDLS----EDVVLIRALRDSNLPKFLTDDA 1696

  Fly  1889 NRFEMLLRNVFPEIGSSPAPETQ---LHQSLSAAFAQLGLCRSERQIEKALQLHEQLQKRMGVVL 1950
            ..|..::.::||.:   ..||..   ||.::........|......::|.:||:|.:..|.||:|
  Rat  1697 LLFSGIISDLFPGV---QIPEHDYGILHSTIVDVMISQNLQPEICMVKKVIQLYETMLVRHGVML 1758

  Fly  1951 VGPPGCGKSTIISLLKQALCGTQ-----------LKVHTISPKSMSRIQLLGRLDADTRQWQDGV 2004
            |||.|.||:|:..:|.:.|...:           :|...::|||::..:|.|.::..|.:|:||:
  Rat  1759 VGPTGGGKTTVYQVLAETLGNLEKLNTGNPFYQPVKTFVLNPKSITMGELYGEVNNVTLEWKDGL 1823

  Fly  2005 LTHTAVAVNQESSQVHSWIVCDGSIDPEWIEALNSVLDDNKLLTLPSGWRIQFGSNVNFIFETDD 2069
            :..:..|...::|:.|.||:.||.:|..|||.:|:||||||:|.|.:..||:....|:.:||..|
  Rat  1824 MALSVRAAVNDTSEDHKWIISDGPVDALWIENMNTVLDDNKMLCLANSERIKLTPQVHMLFEVQD 1888

  Fly  2070 VRHASPATISRMGIVNMSYDYYPAD-----------GILKHELS---KEPYGDLLQSYVDGNFQY 2120
            ::.|||||:||.|:|.:.    |.:           ..|..:||   :|...:|...|||...::
  Rat  1889 LKVASPATVSRCGMVFVD----PEELKWMPYVKTWMSTLSKKLSEEIREYLLNLFNRYVDDGLRF 1949

  Fly  2121 AVNWIESQLLLTHLPGINRAH------LLRSLLLQLHGT-QSLEEYGAAT----------LRALF 2168
             ||...:|.    :|.::.:.      ||.||||...|. .|||:....|          |.:|.
  Rat  1950 -VNKKCTQA----IPQVDISKVTTLCCLLESLLLSKDGNILSLEQMKLNTVVCQTFVFCYLWSLG 2009

  Fly  2169 GYMPNDRQREFAQLILKH------ANLYVANPNYAEL--THYESSRNSLEQYAVDAIETPEKGSQ 2225
            |.:..:....|...|...      |.|    |:..:|  .|.:.....|:.:  :.|....|.|:
  Rat  2010 GNLTENHWDSFDTFIRTQFDDNPDARL----PSSGDLWSIHVDFDTKRLDPW--ERIIPTFKYSR 2068

  Fly  2226 -------LIITSYMKSYLDILETLLKTQGTRLPPFMLIGPSGSGKTLL---LQRAVLENSGYQLA 2280
                   |:.|:....|..::|.||..:.:    .:..|.:|.||:::   |...:.|::||...
  Rat  2069 EVPFFEMLVPTADTVRYGYLMEKLLAVRHS----VLFTGTTGVGKSVIAKGLLNRIQESAGYVPV 2129

  Fly  2281 TINCSTQL----TPRYILHTLKTHCVTVSGIKGREYRPKQARLVLFMKNLDLCQQDSWGACEVVE 2341
            .:|.|.|.    |...|...|:.....:.|..|.:      ::|:|:.:|::.:.|.:|:...:|
  Rat  2130 YLNFSAQTSSARTQEIIESKLERKRKNILGAPGNK------QVVIFVDDLNMPRLDRYGSQPPIE 2188

  Fly  2342 LLFQLAQRGGFYAEN-LEWIGVSGLQL---CASIGGNTGKIAPRYFAINQFVRVSRPTSQDMLEI 2402
            ||.|....||||..| |.|..:..:.:   ||..||....:.||:......:.:..|:...:.:|
  Rat  2189 LLRQYQDFGGFYDRNKLFWKEIQDVTIVSACAPPGGGRNPVTPRFIRHFSMLCLPMPSEHSLKQI 2253

  Fly  2403 VQRRLEPLLEEHFRGSENRGRSGVNLQHVSESLMDCFEKLQATFTNVGGRQAHYQFS----PKCI 2463
            .|..|...|.:.....:...      .::.|:.::.:.::.........: :||.|:    .||:
  Rat  2254 FQAILNGFLADFTEAVKQTS------SNIVEAAVEIYNRMSVDLLPTPAK-SHYVFNLRDLSKCV 2311

  Fly  2464 MKLLDALVFYPASDFNE----ALYC-ELLGMFRDRLISEEHVQQFEGILKQTMRKYYG--KEKVF 2521
            ..:|..   .|.:...|    .|:| |...:|.||||:.|....|..||.:...|::|  .:..:
  Rat  2312 QGILQC---DPGTIREEMQIFRLFCHECQRVFHDRLINNEDKHYFHVILTEMANKHFGIAIDLEY 2373

  Fly  2522 FVPK-----------SPKSRGHLHCLTHDEWMEEVQRQVTICNTENYSITAP------ITEELLS 2569
            |:.|           :.|:......|...|.:|.|.:..    .::|::|.|      ..::.:.
  Rat  2374 FLSKPIIFGDFIKFGADKADRIYDDLPDIEKIENVLQDY----LDDYNLTNPKEVKLVFFQDAIE 2434

  Fly  2570 HVARITRVLSRTDAHMLILGQSGGRHLDAIFTAATFQEAKVVTLQGGPSYDLTDFYNDLKVAMQT 2634
            ||:||.|::.:...:.|::|..|.........||.....|.:.::....|:...|:.||:...:.
  Rat  2435 HVSRIARMIRQERGNALLVGVGGTGKQSLTRLAAHICGYKCLQIELSRGYNYDSFHEDLRKLYKM 2499

  Fly  2635 AALEQQMSYLLIEQCWLSYVPDILKPIEALLEGSEILELF-GDDLETV-ASTLKQAAQL---EGY 2694
            |.:|.:....|.....: .|.:.|:.|..:|...|:..|| .|:||.| |:|..:|.::   ||.
  Rat  2500 AGVEDKNMVFLFTDTQI-VVEEFLEDINNILNSGEVPNLFEKDELEQVLAATRPKAKEVGISEGN 2563

  Fly  2695 QESMGTYFLKRARDYLHIIIVLDPNSAKVQDYFNNFPALHRQMDLLYVRGESRETIAILPKQFIE 2759
            ::.:..||:.|.|..|||::.:.|.....:.....||:|.....:.:.....||.:..:.|.|..
  Rat  2564 RDEVFQYFISRVRQKLHIVLCMSPVGEAFRSRCRMFPSLVNCCTIDWFVQWPREALLSVSKSFFS 2628

  Fly  2760 LLNESIAGGGSGRGKVP--------TCSHFADISDELPSEETSQRYY-------QLIRTYFHMYN 2809
            :::   .|....:.|:.        :.||.||    ....|..:|||       :||..|..|..
  Rat  2629 VVD---TGNEELKEKLSLMCVNVHLSVSHMAD----RYYSELRRRYYTTPTSYLELINLYLTMLT 2686

  Fly  2810 NAANEIDQRLGKLQMGVDKLASAHALVDTLKSNAAAQEQALGEKRQLANEALEMISFTMRNANEQ 2874
            ....::.....::..|:.||...:.|||.:|.:.:|.|..|.:|.|.....:|.:.....:|::.
  Rat  2687 EKRKQLVSARDRVTNGLTKLLETNILVDKMKLDLSALEPVLFQKSQDVEALMEKLVVDQESADQV 2751

  Fly  2875 KSSMLELKQQTQKSSEQLKIRQKEIQQELAEVEPILAEASNAVGQIKSEALSEIRSLRAPPEAVR 2939
            ::.:.|.:...:..:|:.:....:.|::|.|..|.|..|:.|:..:....:||||....||:.|.
  Rat  2752 RNVVQEDEAIAKVKAEETQAIADDAQRDLEEALPALEAANKALDSLDKADISEIRVFTKPPDLVM 2816

  Fly  2940 DILEGVLRLMGIRDTSWNSMKTFLAKRGVKEDIRSLDPARISPENCEAVERLLLAKGDSYEAKNA 3004
            .::|.:..|:..: ..|.:.|..|........:...|...|.|:....::|.:  ....:..:..
  Rat  2817 TVMEAISILLNAK-PDWPTAKQLLGDSNFLRRLLEYDKENIKPQILSKLQRYI--NNPDFVPEKV 2878

  Fly  3005 KRASAAAAPLAAWVQASVRYSRVIQSIKPLEREQNELQKNLNAAEDEMQELASGLDDVDKRVKQL 3069
            ::.|.|...:..||:|...||||::.::|..::....|..|:|....::|..:.|..|:::::.|
  Rat  2879 EKVSKACKSMCMWVRAMDLYSRVVKEVEPKRQKLRAAQAELDATITTLKEKQALLKQVEEQIRAL 2943

  Fly  3070 SAKLQTYTQEAAVLELKLQEASGTLQAAELLVEKLSAEYTTWSLQLTELKKAHKTLDAKTLLIAI 3134
            ..:......|...|...:......|..|..|...|..|...|...:.:.::....:.....:.|.
  Rat  2944 QEEYDKGVNEKESLAKTMALTKARLVRAGKLTAALGDEQVRWEESIEKFQEEIANIVGNVFIAAA 3008

  Fly  3135 AINYCAGLGLEQR-----CSSLKRLAADFHLPSDFDLRGSLLTEQQQIIWESQGLARDAQIIESA 3194
            .:.|......:.|     |.....||.|..:...|.|..:|....:...|.:.||.||....|:.
  Rat  3009 CVAYYGAFTAQYRQLLIECWIDSCLALDIPIDPSFSLINTLGDPYEIRQWNADGLPRDLISTENG 3073

  Fly  3195 ALLREMLSLPYGACPIPLLLDPTQTAAAWLMAHLKGSG-RPCELTTHGNDRLPYQLELAVRFGKT 3258
            .|:.:       ....||::||...|..|:......|| :..:||.....|:   ||.::|.|..
  Rat  3074 ILVTQ-------GRRWPLMIDPQDQANRWIRNKESKSGLKVIKLTDTNFLRI---LENSIRLGLP 3128

  Fly  3259 LLVTDCEQLRPPVLQ-LLQGHVFVRFNKRQLAIGSKLVDLHESFQLVLISKSHRLDLPEEQRSQL 3322
            :|:.:..::..|.|: :|....|:...:..:.:|...:|..:||:..:.:|........|...::
  Rat  3129 VLLEELREVLDPALEPILLKQTFMSGGRLLIRLGDSDIDYDKSFRFYMTTKMPNPHYLPEVCIKV 3193

  Fly  3323 NVLKFTVTAAGLADQLMSKAIVLKNGELEQQRIELLQKEGHLLKQRMEMQDKLLEQLSKSEGDIL 3387
            .::.||||.:||.|||:|..:.|:..|||.||::|:.:......|...::||:|:.|..|||:||
  Rat  3194 TIINFTVTKSGLEDQLLSDVVRLEKPELEGQRVQLIVRINSDKNQLKSIEDKILKLLFTSEGNIL 3258

  Fly  3388 KNEQLLESLNEIKQGSTQIDEALKQSGQIRDTLLAQFGSLRELSSRAATFYAGLIQGYELSPL-- 3450
            .||:|:::|.:.|..|..|...||::......:.......|.::::.:..|..:....|:.|:  
  Rat  3259 DNEELIDTLQDSKITSGAIKTRLKEAESTELMINIARERYRPVATQGSVMYFVIASLSEIDPMYQ 3323

  Fly  3451 ----VYIELFLGALSKSQRDESK------VYDCLVRSVYMNLARATSRDSQLSLSLWVC--HQAY 3503
                .:.:||...:..|::.:|.      :....:.:.|.|::|......:|..|..:|  ....
  Rat  3324 YSLKYFKQLFNTTIETSEKSDSLQERLAILLQQTLLTAYTNVSRGLFEQHKLIYSFMLCVDIMRQ 3388

  Fly  3504 PDRLNPKEWELFVNNFMGSSDGSMVLSQLGKLPDC--MPKEAQLKLAMLLQLFP----------- 3555
            .::|...||..|:....|..      .:....|:.  :|.:.......|.:.||           
  Rat  3389 QEQLTEAEWNFFLRGSAGME------KERPPKPEAPWLPIQMWFSCCDLEEWFPIFEGLTRHILL 3447

  Fly  3556 -DLRSKLQLEKDYI----WRGF----IEAQADDVLPALGSSFQRVLIAQIFRPDLMLHQLRKVSS 3611
             .:...|...:.||    |.|:    .|.:.:.|..:..|||.::::.:..:.:.::..|.....
  Rat  3448 HPISISLGSFETYINPQSWEGYPKQRHEEEKEHVWGSNFSSFHKLILVKCCKEEKVVFALTDFVI 3512

  Fly  3612 DLLGISPDASTQPSVEQLLQQSSCDRPILMVSHAENDPTTELRKWAN-----QKYREMAIGKG-- 3669
            :.||.....:....:..|.|..|...|::.:....:||....:::|.     ::.:.:::|:|  
  Rat  3513 ENLGKQFIETPPVDLATLYQDMSSSTPLVFILSTGSDPMGAFQRFARESGYAERVQSISLGQGQG 3577

  Fly  3670 --VEKRVLSEMRQAAIDGHWLCVKNVHLVPEFLTQMERELSEI----QKSKD-FRLWLLCESTEG 3727
              .||.:    :.|...|:|:.::|.||...::..||..:...    |..|| |||:|.......
  Rat  3578 PIAEKMI----KDATKSGNWVFLQNCHLAVSWMLAMEELIKTFTDPNQSIKDTFRLFLSSMPCST 3638

  Fly  3728 FSEAAIYKCLKVRYEQPKGLKQIVMRLLQNFAAEQDQKLKNQPKSLKMRLVYFVLT---AVLQQR 3789
            |....:...:||..|.||||:..:.|.   |........:.....:|.|.:.|.:.   |::|:|
  Rat  3639 FPVTVLQNSVKVTNEPPKGLRANIRRA---FTEMTPSFFEENILGMKWRKLIFGICFFHAIIQER 3700

  Fly  3790 RQFIPQGWSKYYEFGEADLKAALGILRMMDQQLNSGKCDWLLMQRLSEALAYGGRVNNQRDLEIL 3854
            ::|.|.||:..|||.::|.:.||..|.:   ..:.||..|..:..::..:.|||||.:..|...|
  Rat  3701 KKFGPLGWNICYEFNDSDRECALLNLNL---YCHEGKIPWDALIYITGEITYGGRVTDTWDQRCL 3762

  Fly  3855 TTYLNQFCSADVLSNR--WSPLGLSLSIPTSGQLQDYYAALEKLPDTDEPSMYGL---ANQAQQQ 3914
            .|.|.:|.|.:.|.:.  :|..|:..: |.:..||::...:|.||..|:|.::|:   ||...|.
  Rat  3763 RTVLKRFFSPETLEDEYTYSESGIYFA-PLADSLQEFKDYIEDLPLIDDPEIFGMHENANLVFQY 3826

  Fly  3915 REIEQAKRVIKELRGLHYGRGLAKDSGGAGESKGNDQLTGRQKLEQQIKPLL--NLWRKLAASCT 3977
            :|.......|.|::        .:.|.| ||.|.||::.  |:|...|:..:  :|..:.|:...
  Rat  3827 KETNTLITTILEVQ--------PRSSSG-GEGKSNDEIV--QELVASIRTRVPESLQMEGASETL 3880

  Fly  3978 IIQ----TMKEAKTDVGESPWALFVLAELKLGADLYGIVH---QTLSQMHAWLKESQEVDGSTLR 4035
            .::    .:....|.:|:         |:....:|..::|   :||::..|.|....|......:
  Rat  3881 FVKDPQGRLNSLTTVLGQ---------EVDRFNNLLKLIHISLETLNKAIAGLVVMSEEMEKVYQ 3936

  Fly  4036 TLAEQQIPASWLKLWPGPGSNSAVDFLRAL 4065
            :....|:|:.|        ||:|...|:.|
  Rat  3937 SFLNNQVPSLW--------SNTAYPSLKPL 3958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btvNP_001036369.3 DHC_N1 200..618 CDD:285571 81/403 (20%)
DHC_N2 1072..1481 CDD:285579 122/451 (27%)
P-loop_NTPase 1621..1847 CDD:304359 98/225 (44%)
P-loop_NTPase 1919..>1967 CDD:304359 17/47 (36%)
P-loop_NTPase 1947..2081 CDD:304359 54/144 (38%)
P-loop_NTPase 2565..>2733 CDD:304359 44/172 (26%)
MT 2821..3138 CDD:289543 65/316 (21%)
AAA_9 3179..3401 CDD:289547 64/223 (29%)
Dynein_heavy 3536..>4051 CDD:281078 128/567 (23%)
Dnah6XP_038964640.1 DHC_N2 887..1307 CDD:400618 123/453 (27%)
DYN1 <1127..3774 CDD:227570 697/2766 (25%)
AAA_6 1441..1767 CDD:403853 131/340 (39%)
Dynein_C 3827..4152 CDD:408026 33/160 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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