| Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_444367.1 | Gene: | Pcdhb12 / 93883 | MGIID: | 2136747 | Length: | 789 | Species: | Mus musculus |
| Alignment Length: | 830 | Identity: | 195/830 - (23%) |
|---|---|---|---|
| Similarity: | 322/830 - (38%) | Gaps: | 192/830 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 198 TGDIFVLKPLDRDQPNGRPQ---WRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFG 259
Fly 260 NVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNV------IEEETGAPIFEIEPETGLIK 318
Fly 319 TAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVK--DLNDMPPQFTKDEWVTEVDETNGTYI 381
Fly 382 PETPILTVTVQDEDETNTFQYKVVPNSG----FGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSS 442
Fly 443 GFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQF 507
Fly 508 KATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTA 572
Fly 573 TATLTVIVKDVNDNAPTFAQ-DYKPTLPENVS-GKKILEVAAKDPDDRLRGNGGPFTFRLDPLAS 635
Fly 636 DEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDV 700
Fly 701 NDNKMQPGSKSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTM 765
Fly 766 RAGTRRGRYQLRFKVYDREHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVK 830
Fly 831 NQVEPSKL--ERFRNKLAELLYTDRDN---------------VDVFSVQLKEGSPY-PLTDVHFA 877
Fly 878 ARSATQQPY-----FKAVRLNGVVQMHREEIEKDVGLNITMVNINECLHEGKGKCGSNSCTSKVE 937
Fly 938 LGKKP-YTVSVNRTALVGVRLDISAQCVCRARNFTHQDHNCRTHLCYNGG 986 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
| Cadherin_repeat | 140..248 | CDD:206637 | 14/52 (27%) | ||
| Cadherin_repeat | 256..359 | CDD:206637 | 26/110 (24%) | ||
| Cadherin_repeat | 379..481 | CDD:206637 | 22/105 (21%) | ||
| Cadherin_repeat | 489..586 | CDD:206637 | 25/96 (26%) | ||
| Cadherin_repeat | 594..703 | CDD:206637 | 26/109 (24%) | ||
| Cadherin_repeat | 724..801 | CDD:206637 | 11/76 (14%) | ||
| EGF_CA | 977..1010 | CDD:238011 | 4/10 (40%) | ||
| LamG | 1013..1198 | CDD:238058 | |||
| EGF_2 | <1233..1259 | CDD:285248 | |||
| Laminin_G_2 | 1293..1428 | CDD:280389 | |||
| EGF_CA | 1497..1535 | CDD:238011 | |||
| Cadherin_C | 1583..1719 | CDD:279398 | |||
| Pcdhb12 | NP_444367.1 | Cadherin_2 | 24..105 | CDD:285466 | 8/35 (23%) |
| Cadherin_repeat | 133..231 | CDD:206637 | 27/108 (25%) | ||
| Cadherin_repeat | 240..335 | CDD:206637 | 25/115 (22%) | ||
| Cadherin_repeat | 345..439 | CDD:206637 | 25/94 (27%) | ||
| Cadherin_repeat | 447..549 | CDD:206637 | 26/110 (24%) | ||
| Cadherin_repeat | 568..656 | CDD:206637 | 22/110 (20%) | ||
| Cadherin_C_2 | 680..762 | CDD:293101 | 17/104 (16%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||