DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CadN2 and Fat1

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_017455748.1 Gene:Fat1 / 83720 RGDID:621254 Length:4624 Species:Rattus norvegicus


Alignment Length:1783 Identity:433/1783 - (24%)
Similarity:706/1783 - (39%) Gaps:404/1783 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TKFVRIGIADKNDSPPYFDRFLYE---TEIDENADLQSTVLTVNAKDHNESTNIRYQITGGNIGN 80
            |..|.:.:.|.|||||.|...:|:   :|.|....:.:.:.|.:|.....:..:.|.||||:...
  Rat  2925 TAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVSYFITGGDALG 2989

  Fly    81 AFAVQNTTG--VIYVASPLDYETRPRYELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRT 143
            .|||:|...  .:||..|||.|.:..|.|.:.||....::...|.:.|.|.|||.||.:|..|..
  Rat  2990 QFAVENMQNDWRVYVKKPLDREQKDSYLLTVTATDGTFSSKARVEVKVLDANDNSPVCERTAYSD 3054

  Fly   144 QITEEDDRNLP-KRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPL 207
            .|.|:   .|| |.::||:|||.|:.....|.|.|.|.|.:       ||.:|..||::..|..|
  Rat  3055 AIPED---ALPGKLVMQVSATDADIRSNAEITYTLFGSGAE-------KFKLNPDTGELRTLALL 3109

  Fly   208 DRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVM 272
            ||::   :..:...|.|.|.||...  .|.|.:.|:|:|||.|:|....|...|.||...|:.:.
  Rat  3110 DREE---QAVYHLLVKATDGGGRSC--QATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLT 3169

  Fly   273 TMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVV 337
            .:.|.|.|   ...|.|:.||:    ::...|.  |.|..::|:::... .||||....|::.:.
  Rat  3170 RVQATDAD---AGLNRKISYSL----LDSADGQ--FSINEQSGILQLEK-HLDRELQAVYTLTLK 3224

  Fly   338 AMDGG---GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED-ETN 398
            |.|.|   .|..|||..:.|.|:||.||.|...|:...|.|   ..:..|.:|.|.....| |.|
  Rat  3225 AADQGLPRKLTATGTVVVSVLDINDNPPVFEYREYGATVSE---DIVIGTEVLQVYAASRDIEAN 3286

  Fly   399 T-FQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSD 462
            . ..|.::..:..|  ||::   ...||::.||:.||||   .|.|:...::..|.|.  |..||
  Rat  3287 AEITYAIISGNEHG--KFSI---DSKTGAIFIIENLDYE---SSHGYYLTVEATDGGT--PSLSD 3341

  Fly   463 KYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRS 527
                 .:.|.:.:.|||||.|.|.::.....:.||..:...:....|.|||...:|.:.|.|:..
  Rat  3342 -----VATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPVITIMADDADGPSNSHILYSIIEG 3401

  Fly   528 TNRKRQFAISD-RGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFA 591
             |:...|.|.. ||.:.:.:||||||...:.:.:.|.|:|:|.|..|.|:.:.|.|||||||.|:
  Rat  3402 -NQGSPFTIDPVRGEIKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFS 3465

  Fly   592 QD-YKPTLPENVS-GKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNEN 654
            :| |...:.||.. |..:|::...|.|.  ..||.||:|.:.....|.:   |:|       |::
  Rat  3466 RDNYSVIIQENKPVGFSVLKLVVTDKDS--SHNGPPFSFAIVSGNDDNM---FEV-------NQH 3518

  Fly   655 GVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVLVY---- 715
            ||.:.::  ...|:.:..|.:.:::.|||.|.::..:.:.:.:  :.::...|....:.::    
  Rat  3519 GVLLTAA--TVKRKVKDHYLLHVKVADNGKPQLSSLTHIDIRV--IEESIHPPAILPLEIFITAS 3579

  Fly   716 --NYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQ--RFKLDTDTGILTMRAGTRRGRYQL 776
              .|.|    ..||:::..|.|.:|.    ..:.:..|.  .|.:.:..|.|........|:|.|
  Rat  3580 GEEYSG----GVIGKIHATDQDVYDT----LTYSLDPHMDGLFSVSSTGGKLIAHRKLDIGQYLL 3636

  Fly   777 RFKVYDREHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRT-WNPVKNQVEPSKLER 840
            ...|.|   |:....|:::|.::.:|.|.:....::|.:::|.|:||.. |            ..
  Rat  3637 NVSVTD---GKFTTVADITVHIQQVTQEMLNHTIAIRFANLTPEEFVGDYW------------RN 3686

  Fly   841 FRNKLAELLYTDRDNVDVFSVQLKEGSPYPLTDV-HFAARSATQQPYFKAV--RLNGVVQMHREE 902
            |:..|..:|...::::.:.|:|..|  |:...|| .|..:|...|...|.:  ::|..|    .:
  Rat  3687 FQRALRNILGIRKNDIQIVSLQPSE--PHSHLDVLLFVEKSGGTQISTKQLLHKINSSV----TD 3745

  Fly   903 IEKDVGLNITMVNINECLHEGKGKCGSNSCTSKVELGKK-PYTVSVNRTALVGVRLDISAQCVCR 966
            ||:.:|:.|  :::.:.|..|. .|....|..||.:.:. ..|.|..|.:.|..|...:|.|:|:
  Rat  3746 IEEIIGVRI--LDVFQKLCAGL-DCPWKFCDEKVSVDENIMSTHSTARLSFVTPRHHRTAVCLCK 3807

  Fly   967 ARNFTHQDHNCRTHLCYNGGRCVETRNGPK--CVACPVGYNGPRCQ-QSTRSFRGNGWAWYPPLQ 1028
            ..........|..:.|..|..||......|  || || |....:|. .|:.:|.|:.:..|..::
  Rat  3808 DGTCPPVHQGCEDNPCPAGSECVADPREEKYSCV-CP-GGGFAKCPGSSSITFTGSSFVKYRLME 3870

  Fly  1029 LCQESHLSLEFITRV----ADGLILY-NGPIVPPKPEETVISDFIALELEQGYPRLLIDFGSGTL 1088
              .|:.|.::...|:    :..:::| .|            :|:..||:..|..:...|.|||..
  Rat  3871 --NENRLEMKLTMRLRTYSSHAVVMYARG------------TDYSILEIHTGRLQYKFDCGSGPG 3921

  Fly  1089 ELRVKTKKTLDDGVWHRLDIFWDTENVRMVVDFCRTALVSEMEDGTPPEFDDNACQARGQIPPFA 1153
            .:.|::.: ::||.||.:.:..:....::|:|...|                    |.|..|...
  Rat  3922 IVSVQSIQ-VNDGQWHAVSLEVEGNYAKLVLDEVHT--------------------ASGTAPGAL 3965

  Fly  1154 ESLNLNQPLQLGGLYRQHFDQTLYNWQYAFSSKGFDGCIRNVIHNSEHYDLAFPALARNSFP-AC 1217
            ::|||:..:..||..||...:...|.|.|   .||.||:.::..|.:...|       |:.| |.
  Rat  3966 KTLNLDNYVIFGGHLRQQGTKHGRNTQVA---NGFRGCMDSIYLNGQELPL-------NNKPRAY 4020

  Fly  1218 PQTDEVCLKTEHTARCW---EHGNCVASLVQAKCHCQPGWMGPGCNVPTIPTTFKAQSYVKFALS 1279
            ...:|           |   .|| |:.:..: .|...|...|..|| |: ||             
  Rat  4021 AHIEE-----------WVDLAHG-CLLTATE-DCSSNPCQNGGVCN-PS-PT------------- 4057

  Fly  1280 FEPDRFSTQLQLRFRTREQGGELFRVSDQHHREYAILELRRGHLQFRYNLNSMRNEEQLLTLTAI 1344
                               ||...:.|..|...|.           ..::|...:...|      
  Rat  4058 -------------------GGYYCKCSALHAGTYC-----------EVSVNPCSSNPCL------ 4086

  Fly  1345 AVNDGQWHVIRISRYGSAALMELDGGESRRYNESFHFTGHQWLTIDKQEGVYAGGKAEYTGIKTF 1409
                          ||...::: :||                 .:.:..|:|.|           
  Rat  4087 --------------YGGTCMVD-NGG-----------------FVCQCRGLYTG----------- 4108

  Fly  1410 EVQSDFQRSCLDDIRLDGKHLPLPPAMNGTQWGQATMARNLERNCPSNRPCSNVICPDPFDCVDL 1474
                                                      :.|..:..|.:..|.:...|.|.
  Rat  4109 ------------------------------------------QRCQLSPYCKDEPCKNGGTCFDS 4131

  Fly  1475 WNEYECTCSEG----RIMSSDTKGCVDRNECLDLPCLNGATCINLEPRLRYRCICPEGYWGENCE 1535
            .:...|.|..|    |..|       |.:||...||.|||.|.|...  .|.|.|.:.|.|::||
  Rat  4132 LDGAVCQCDSGFRGERCQS-------DIDECAGNPCRNGALCENTHG--SYHCNCSQEYRGKHCE 4187

  Fly  1536 ------LVQEGQRLKLSMGALGAIFVCLIIILILALIFVLYSRKRKTTKKK-------KRSG--- 1584
                  .|.....:.|:.|.  .|.|.:..|.:|.::||| .||..:.|||       ||.|   
  Rat  4188 DATPNHYVSTPWNIGLAEGI--GIIVFIAGIFLLVVVFVL-CRKMISRKKKHQAEPEDKRLGPTT 4249

  Fly  1585 -----------PEKDVRETV--------ISY----EDEGGGEDDMTAFDITPLQ--------IPI 1618
                       |.|::...:        |||    ..:.....|..:|:.:.:.        .|.
  Rat  4250 AFLQRPYFDSKPSKNIYSDIPPQVPVRPISYTPSIPSDSRNNLDRNSFEGSAIPEHPEFSTFNPE 4314

  Fly  1619 SAQGGPPDIAACKMPIIYPVMTLLPPGQELNVAYLMEERKQRIDKDN---------NAPPFDDLR 1674
            |..|....:|.|.   :.|.:...||....:.:..:::.....|.|.         :..|.::..
  Rat  4315 SMHGHRKAVAVCS---VAPNLPPPPPSNSPSDSDSIQKPSWDFDYDAKVVDLDPCLSKKPLEEKP 4376

  Fly  1675 NFTFEGSGSIAE--SLSSLASGTDDENQ 1700
            :..:....|::|  ||||..|.:.|:|:
  Rat  4377 SQPYSARESLSEVQSLSSFQSESCDDNE 4404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637 28/95 (29%)
Cadherin_repeat 140..248 CDD:206637 36/108 (33%)
Cadherin_repeat 256..359 CDD:206637 30/105 (29%)
Cadherin_repeat 379..481 CDD:206637 29/103 (28%)
Cadherin_repeat 489..586 CDD:206637 31/97 (32%)
Cadherin_repeat 594..703 CDD:206637 24/109 (22%)
Cadherin_repeat 724..801 CDD:206637 17/78 (22%)
EGF_CA 977..1010 CDD:238011 11/34 (32%)
LamG 1013..1198 CDD:238058 41/189 (22%)
EGF_2 <1233..1259 CDD:285248 7/28 (25%)
Laminin_G_2 1293..1428 CDD:280389 14/134 (10%)
EGF_CA 1497..1535 CDD:238011 15/37 (41%)
Cadherin_C 1583..1719 CDD:279398 28/163 (17%)
Fat1XP_017455748.1 Cadherin_repeat 39..145 CDD:206637
Cadherin_repeat 154..253 CDD:206637
Cadherin 278..357 CDD:421759
Cadherin_repeat 372..>444 CDD:206637
Cadherin_repeat 468..566 CDD:206637
Cadherin_repeat 576..663 CDD:206637
Cadherin_repeat 725..819 CDD:206637
Cadherin_repeat 827..924 CDD:206637
Cadherin_repeat 932..1016 CDD:206637
Cadherin_repeat 1043..1136 CDD:206637
Cadherin_repeat 1144..1242 CDD:206637
Cadherin_repeat 1251..1345 CDD:206637
Cadherin_repeat 1363..1476 CDD:206637
Cadherin_repeat 1485..1582 CDD:206637
Cadherin_repeat 1590..1686 CDD:206637
Cadherin_repeat 1695..1785 CDD:206637
Cadherin_repeat 1793..1898 CDD:206637
Cadherin_repeat 1919..1994 CDD:206637
Cadherin_repeat 2008..2101 CDD:206637
Cadherin_repeat 2109..2198 CDD:206637
Cadherin_repeat 2211..2303 CDD:206637
Cadherin_repeat 2311..2410 CDD:206637
Cadherin_repeat 2418..2512 CDD:206637
Cadherin_repeat 2520..2616 CDD:206637
Cadherin_repeat 2625..2718 CDD:206637
Cadherin_repeat 2732..2829 CDD:206637
Cadherin_repeat 2837..2937 CDD:206637 3/11 (27%)
Cadherin_repeat 2946..3043 CDD:206637 28/96 (29%)
Cadherin_repeat 3056..3145 CDD:206637 35/103 (34%)
Cadherin_repeat 3153..3250 CDD:206637 31/106 (29%)
Cadherin_repeat 3258..3355 CDD:206637 32/114 (28%)
Cadherin_repeat 3363..3460 CDD:206637 31/97 (32%)
Cadherin_repeat 3469..3560 CDD:206637 24/106 (23%)
Cadherin_repeat 3585..3658 CDD:206637 18/83 (22%)
LamG 3878..4009 CDD:214598 37/166 (22%)
EGF_CA 4040..4074 CDD:238011 13/78 (17%)
EGF_CA 4077..4112 CDD:238011 9/125 (7%)
EGF 4117..4147 CDD:394967 7/29 (24%)
EGF_CA 4151..4187 CDD:238011 15/37 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100175
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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