DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and si:dkey-30c15.12

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_001352785.1 Gene:si:dkey-30c15.12 / 793186 ZFINID:ZDB-GENE-060503-920 Length:789 Species:Danio rerio


Alignment Length:603 Identity:166/603 - (27%)
Similarity:285/603 - (47%) Gaps:73/603 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 ITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDR 209
            |.|.|....||:::::.:|..|   .:.::|.:||.|  .:.|..:.|.:.:::|.::|.|.:||
Zfish    82 IVENDKGPFPKQVVKMKSTAAD---SMTMIYEITGTG--ANEPPINLFKVGKSSGILWVTKAVDR 141

  Fly   210 DQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTM 274
            ::..   ::..||.|.....:.......:.:.:.|.|||.|:..|..|.|.|.|.....:.||.:
Zfish   142 EETE---EYTLTVHATSNNRDYTEKPVQLVIKVLDQNDN
KPRCTQNPYTGEVLERAKPNTPVMQV 203

  Fly   275 SAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVC-CLDRERTPDYSIQVVA 338
            :|.|.|||. |:|:.:.|.:    :::|..:.:|.|:..||:|..|:. .||||....|::.|.|
Zfish   204 TAEDLDDPT-SSNSIVRYKL----LKQEPNSGVFHIDQTTGVISLALMGILDRETDAVYNLAVEA 263

  Fly   339 --MDGGGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTF- 400
              |||.||..|...:|::.|.||..|.|:::.:...|.|.....:    :..:||.|:||..|. 
Zfish   264 ADMDGHGLSSTCMVAIKITDSNDH
RPLFSQEYYAETVKENKAGEV----VARLTVTDKDEPLTVN 324

  Fly   401 ---QYKVVPNSGFGADKFAMVRNG-DGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGS 461
               ::.::..:..|....:...|| ||.  :..::.||:|   |::.|...|.|.   ::.|...
Zfish   325 ALSKFTIIQGNDRGFFNISTDHNGMDGI--ITTLKALDFE---QANSFSLLIMVE---NEAPFAL 381

  Fly   462 DKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVR 526
             .:..:.:.|.:.:.|:|: .|.||....::.||||..||:::.::.|||.|.....|:.||: |
Zfish   382 -PFRTSTATVTITVLDVNE
-PPVFDLPEKQIIIYEDQSVGSMISKYTATDPDTDRAQKIRYKL-R 443

  Fly   527 STNRKRQFAISDRGAVSIQRPLDRETQ----DRHHIQILAIDDGSPARTATATLTVIVKDVNDNA 587
            ...........|.|.::|...||||.:    .::.:.:||.||.....|.|.|..:.:.|||||.
Zfish   444 GDIANWLEITEDTGHITISSSLDREAKFIRDGQYKVLVLAFDDDDEPATGTGTFMIKLLDVNDNP 508

  Fly   588 PTFAQDYK----PTLPENVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDR 648
            |...| :|    .|.|:.|   ::....|.:|:     ||.|||..|    .:|.|:.:.:..| 
Zfish   509 PVLEQ-HKVQMCSTEPKPV---RLTITDADEPE-----NGPPFTTEL----HEEFKSNWTISSD- 559

  Fly   649 RGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVL 713
                .|...::|||||.   |...:::.:.:.|  :..:...|:|.|   :|.|.|...|:.|..
Zfish   560 ----SNSSVLLSSLRPL---AVGEHSLWLRLSD--SKLLFQDSSLIV---NVCDCKGDDGTCSSP 612

  Fly   714 VYNYQGQSQDTPIGRVYV 731
            .|   ..|..||:..|:|
Zfish   613 RY---AASISTPLIFVFV 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 23/102 (23%)
Cadherin_repeat 256..359 CDD:206637 36/105 (34%)
Cadherin_repeat 379..481 CDD:206637 22/106 (21%)
Cadherin_repeat 489..586 CDD:206637 31/100 (31%)
Cadherin_repeat 594..703 CDD:206637 27/112 (24%)
Cadherin_repeat 724..801 CDD:206637 4/8 (50%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
si:dkey-30c15.12NP_001352785.1 CA_like 77..177 CDD:333701 23/102 (23%)
Cadherin_repeat 185..287 CDD:206637 37/106 (35%)
Cadherin_repeat 296..399 CDD:206637 23/115 (20%)
Cadherin_repeat 409..507 CDD:206637 31/98 (32%)
Cadherin_C 643..786 CDD:307269
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24027
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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