Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006526383.1 | Gene: | Pcdh1 / 75599 | MGIID: | 104692 | Length: | 1238 | Species: | Mus musculus |
Alignment Length: | 885 | Identity: | 230/885 - (25%) |
---|---|---|---|
Similarity: | 351/885 - (39%) | Gaps: | 187/885 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 VRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDHNESTNIRYQITGGN----IGNAF 82
Fly 83 AVQNTTGVIYVASPLDYE--TRPRYE-LRLEATRNRKNNYTTVVINVRDVNDNPPVFD------- 137
Fly 138 -RQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVY-----FLTGQGIDPDNPANSKFDINR 196
Fly 197 TTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNV 261
Fly 262 TENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 326
Fly 327 ERTPDYSIQVVAMDGG--GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPE-TPILT 388
Fly 389 VTVQDED--ETNTFQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVN 451
Fly 452 DKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVS---IYEDTKVGTILEQFKATDAD 513
Fly 514 QGGHSKVAYKIVRSTNRKRQFAI-SDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLT 577
Fly 578 VIVKDVNDNAPTFAQDYKPTLPENVSGKKILEVAAKDPDDRLRGNGGPFTFRLD-PLASDEIKAG 641
Fly 642 FKVEYDRRGDNEN----------GVAIISSLRPF-----DREAQKSY-AIPIEIKDNGAPAMTGT 690
Fly 691 STLTVTIGDVNDNKMQPGSKSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQRFK 755
Fly 756 LDTDTGILTMR---------AGTRRGRY------------QLRFKVYDREHG--QEDIPANLSVT 797
Fly 798 VRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSK 837 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | 26/97 (27%) |
Cadherin_repeat | 140..248 | CDD:206637 | 21/112 (19%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 37/104 (36%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 31/104 (30%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 25/100 (25%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 26/125 (21%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 19/99 (19%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
Pcdh1 | XP_006526383.1 | Cadherin_2 | 59..138 | CDD:369785 | |
Cadherin_repeat | 172..276 | CDD:206637 | 3/9 (33%) | ||
Cadherin_repeat | 284..383 | CDD:206637 | 26/98 (27%) | ||
Cadherin_repeat | 402..502 | CDD:206637 | 21/109 (19%) | ||
Cadherin_repeat | 512..608 | CDD:206637 | 37/103 (36%) | ||
Cadherin_repeat | 617..711 | CDD:206637 | 33/114 (29%) | ||
Cadherin_repeat | 730..812 | CDD:206637 | 23/82 (28%) | ||
Protocadherin | 815..1029 | CDD:369839 | 59/272 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |