Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006500852.1 | Gene: | Pcdh18 / 73173 | MGIID: | 1920423 | Length: | 1135 | Species: | Mus musculus |
Alignment Length: | 1037 | Identity: | 227/1037 - (21%) |
---|---|---|---|
Similarity: | 384/1037 - (37%) | Gaps: | 238/1037 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 FWVLTNST-YLVTKFVRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNA--KDHNESTNI 69
Fly 70 RYQITGGNIGNAFAVQNTTGVIY----VASPLDYETRPRYELRLEATR---NRKNNYTTVVINVR 127
Fly 128 DVNDNPPVFDRQTYRTQITEEDDRNLP--KRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANS 190
Fly 191 KFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQG 255
Fly 256 IYFGNVTENGTA--GSSVMTMSA-VDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEP--ETG 315
Fly 316 LIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTAS------IRVKDLNDMPPQFTKDEWVTEVD 374
Fly 375 ETNGTYIPETPILTVTVQDED--ETNTFQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYED 437
Fly 438 PLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNV-----PKFDREHIEVSIYED 497
Fly 498 TKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRET--QDRHHIQI 560
Fly 561 LAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVSGKKILEVAA------------- 612
Fly 613 ----KDPDDRLRGN--GGPFTFRLDP-LASDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQ 670
Fly 671 KSYAIPIEIKDNGAPAMTGT-------------------STLTVTIGDVNDN------KMQPGSK 710
Fly 711 SV---LVYNYQGQSQDTPI--GRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTR 770
Fly 771 RGRYQL-RFKVYDREHGQ-----------------------------------------EDIPAN 793
Fly 794 LSVTVRDITAEAVQQ--------------AGSMRLSHIT-------DED--------FVRTWNPV 829
Fly 830 KNQVEPSKLERFRNKLAELLYTDRDNVDVFSVQLKEG------SPYPLTDVHFAARSATQQP 885 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | 24/99 (24%) |
Cadherin_repeat | 140..248 | CDD:206637 | 28/109 (26%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 25/113 (22%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 25/103 (24%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 23/98 (23%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 19/147 (13%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 19/120 (16%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
Pcdh18 | XP_006500852.1 | Cadherin_2 | 32..111 | CDD:369785 | 1/2 (50%) |
Cadherin_repeat | 141..242 | CDD:206637 | 24/100 (24%) | ||
Cadherin_repeat | 250..350 | CDD:206637 | 28/109 (26%) | ||
Cadherin_repeat | 368..461 | CDD:206637 | 25/104 (24%) | ||
Cadherin_repeat | 470..572 | CDD:206637 | 27/113 (24%) | ||
Cadherin_repeat | 587..678 | CDD:206637 | 22/92 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |