DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and CDH22

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_067071.1 Gene:CDH22 / 64405 HGNCID:13251 Length:828 Species:Homo sapiens


Alignment Length:583 Identity:167/583 - (28%)
Similarity:274/583 - (46%) Gaps:84/583 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 ITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDR 209
            :.||.....|..:.::.:...:.|..|.  |.::|:|      |.:.|.|:..||||..::.|||
Human    71 VVEEYTGTEPLYVGKIHSDSDEGDGAIK--YTISGEG------AGTIFLIDELTGDIHAMERLDR 127

  Fly   210 DQPNGRPQWRFTVFAQDEGGEGLV-GYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMT 273
            :|   :..:.....|:|.....|: ..::..:.::||||:.|:|..|.|.|:|.|....|:|||.
Human   128 EQ---KTFYTLRAQARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGSVAELSPTGTSVMQ 189

  Fly   274 MSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVA 338
            :.|.|.|||...::|:|:||:       ..|...|.::|:||:|:|||..||||....|.:.:.|
Human   190 VMASDADDPTYGSSARLVYSV-------LDGEHHFTVDPKTGVIRTAVPDLDRESQERYEVVIQA 247

  Fly   339 MDG----GGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILT----VTVQDED 395
            .|.    |||.|:.|.:|.|.|:||.||:|.:..:...:.|:       .||.|    |..:|.|
Human   248 TDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQES-------APIGTAVGRVKAEDSD 305

  Fly   396 --ETNTFQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQP-LDYE----------------DPLQS 441
              |.....|.:...|..|.|.|.:..:.|...::.::|. ||:|                ||..:
Human   306 VGENTDMTYHLKDESSSGGDVFKVTTDSDTQEAIIVVQKRLDFESQPVHTVILEALNKFVDPRFA 370

  Fly   442 SGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQ 506
            ....||.|                   :.|.|.:.|: |..|:|......:.:.||.:||:::..
Human   371 DLGTFRDQ-------------------AIVRVAVTDV-DEPPEFRPPSGLLEVQEDAQVGSLVGV 415

  Fly   507 FKATDADQGGHSKVAYKIVRSTNRKRQFAI-SDRGAVSIQRPLDRETQDRHHIQILAIDDGSPAR 570
            ..|.|.| ..:..|.|.|.|.::..:.|.| :|.||:...:.|||||...|:|.:||::..:.|:
Human   416 VTARDPD-AANRPVRYAIDRESDLDQIFDIDADTGAIVTGKGLDRETAGWHNITVLAMEADNHAQ 479

  Fly   571 TATATLTVIVKDVNDNAPTFAQDYKPTLPENVS-GKKILEVAAKDPDDRLRGNGGPFTFRLDPLA 634
            .:.|:|.:.:.|||||.|..|..|:..:.|:.. |:.|..::..|.|:...|:  .|.|||.|  
Human   480 LSRASLRIRILDVNDNPPELATPYEAAVCEDAKPGQLIQTISVVDRDEPQGGH--RFYFRLVP-- 540

  Fly   635 SDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI 697
                :|.....:......:|..|:.:....|:|:.|..:.:||.:.|:|.|.::.|.|||:.|
Human   541 ----EAPSNPHFSLLDIQDNTAAVHTQHVGFNRQEQDVFFLPILVVDSGPPTLSSTGTLTIRI 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 25/103 (24%)
Cadherin_repeat 256..359 CDD:206637 41/106 (39%)
Cadherin_repeat 379..481 CDD:206637 25/124 (20%)
Cadherin_repeat 489..586 CDD:206637 31/97 (32%)
Cadherin_repeat 594..703 CDD:206637 28/105 (27%)
Cadherin_repeat 724..801 CDD:206637
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
CDH22NP_067071.1 Cadherin_repeat 83..163 CDD:206637 21/90 (23%)
Cadherin_repeat 172..253 CDD:206637 33/87 (38%)
Cadherin_repeat 282..390 CDD:206637 26/134 (19%)
Cadherin_repeat 401..495 CDD:206637 31/94 (33%)
Cadherin_repeat 502..600 CDD:206637 28/106 (26%)
Cadherin_C 657..817 CDD:279398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9605
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.010

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