DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and cdh26

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_031750413.1 Gene:cdh26 / 595076 XenbaseID:XB-GENE-996979 Length:908 Species:Xenopus tropicalis


Alignment Length:59 Identity:16/59 - (27%)
Similarity:25/59 - (42%) Gaps:3/59 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 GHYLTGTVCYVLGMVAIVLAYEKKIYRQNTITEGITMMTVFTIAVTVLSMVGVVKTVYN 229
            |.|:|..:|.. |:::.|...|....|..|..:  ..:||.|.....||..|..:..|:
 Frog   258 GMYITEKLCRT-GLLSAVDIMEVNPSRGETKRD--VELTVNTALDMTLSCFGKAREGYH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 16/59 (27%)
Cadherin_repeat 256..359 CDD:206637
CA 388..483 CDD:214520
Cadherin_repeat 489..586 CDD:206637
Cadherin_repeat 594..703 CDD:206637
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
cdh26XP_031750413.1 CA 102..183 CDD:214520
Cadherin_repeat 190..291 CDD:206637 9/35 (26%)
Cadherin_repeat 300..413 CDD:206637 4/14 (29%)
Cadherin_repeat 428..520 CDD:206637
CADH_Y-type_LIR 850..904 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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