DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and cdh10a

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_001034722.1 Gene:cdh10a / 568370 ZFINID:ZDB-GENE-060614-1 Length:785 Species:Danio rerio


Alignment Length:670 Identity:186/670 - (27%)
Similarity:293/670 - (43%) Gaps:126/670 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LQSTVLTVNAKDHNESTNIRYQITGGNIGNAFAVQNTTGVIYVASPLDYETRPRYELRLEATRNR 115
            |.|.|:.:...|.|...|..||:.|..            ::...|..|:..| ::.|..|...| 
Zfish    17 LSSPVILLERNDGNLFHNWSYQMKGDK------------MVLHRSKRDWMWR-QFFLSEEYMGN- 67

  Fly   116 KNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQ 180
             ||                     .|..::..:.||.           ||...      |.|:|:
Zfish    68 -NN---------------------QYVGKLRSDKDRG-----------DGTAR------YVLSGE 93

  Fly   181 GIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEG---GEGLVGYADIQVNL 242
            |      |.:.|.|:..:||:...:.|||::.:.     :|:.||...   |..|....:..|.:
Zfish    94 G------AGTVFRIDEKSGDLHATQRLDREEKSS-----YTLQAQAFNRITGLPLEPATEFIVKI 147

  Fly   243 KDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPI 307
            .|||||.|:|.:.:|..:|.|....|:.|:.::|.|.||.....:|||:|||.:       |.|.
Zfish   148 HDINDNEPKFTRAVYAASVPEMSDVGTFVIEVNATDADDATYGNSAKLVYSILQ-------GQPY 205

  Fly   308 FEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD----GGGLKGTGTASIRVKDLNDMPPQFTKDE 368
            |.:|||||:::.|:..:|||...||.:.:.|.|    .|||.||...::.:.|:||.||:|....
Zfish   206 FSVEPETGIVRIALPNMDREVRKDYQVVIQAKDMAGQMGGLSGTTMVNVTLTDVNDSPPRFAYSS 270

  Fly   369 W------VTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNG-DGTGS 426
            :      ..|:..|.|         .:...|.||....:.|...:.|.|.:...::.:. ...|.
Zfish   271 YHLSTYESAEIGSTVG---------RIKANDGDEGENAEMKYRMSDGDGKEYLDIITDEISQEGV 326

  Fly   427 LKIIQPLDYEDPLQSSGFRFRIQVNDKGDD------GPGGSDKYHVAYSWVVVKLRDINDNVPKF 485
            :.|.:.||||   ....:..:::|::...|      || .||.     :.|.|..||: |..|.|
Zfish   327 IVIKKKLDYE---TKRVYTVKVEVSNTHQDPNFFHLGP-FSDT-----AIVKVTARDV-DEPPVF 381

  Fly   486 DREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDR-GAVSIQRPLD 549
            .|......:.|||..||::....|.|.|...: .:.|.|.:.|:.:|.:.|..: |:::|.:.||
Zfish   382 SRTQYVFEVNEDTPKGTVIGTVTARDPDATDY-PILYAIDQHTDPERLYHIDPKNGSITILKSLD 445

  Fly   550 RETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENV-SGKKILEVAAK 613
            ||....|:|.:||.:..:|.:.:...:.:.|.|||||||.||..|:..:.||. :|:.|..::|.
Zfish   446 REVSKWHNISVLASEMNNPHQRSRVPVLIKVLDVNDNAPEFAMIYETFVCENFKAGELIQTISAI 510

  Fly   614 DPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRP-FDREAQKSYAIPI 677
            |.||.|.|:  .|.|.|..|     ...|.:     .|||:..|.|.:.|. |:|.....|.:|:
Zfish   511 DTDDPLVGH--KFVFSLSSL-----NPNFTI-----FDNEDNTARILTRRSGFNRREMSVYYLPV 563

  Fly   678 EIKDNGAPAMTGTSTLTVTI 697
            .|.|:..|..:.|||||:.:
Zfish   564 VISDSDYPIQSSTSTLTIRV 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 17/80 (21%)
Cadherin_repeat 140..248 CDD:206637 26/110 (24%)
Cadherin_repeat 256..359 CDD:206637 37/106 (35%)
CA 388..483 CDD:214520 23/101 (23%)
Cadherin_repeat 489..586 CDD:206637 28/97 (29%)
Cadherin_repeat 594..703 CDD:206637 34/106 (32%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
cdh10aNP_001034722.1 CA 77..155 CDD:214520 27/105 (26%)
Cadherin_repeat 161..261 CDD:206637 37/106 (35%)
Cadherin_repeat 270..377 CDD:206637 25/125 (20%)
Cadherin_repeat 385..482 CDD:206637 28/97 (29%)
Cadherin_repeat 489..584 CDD:206637 34/107 (32%)
CADH_Y-type_LIR 718..776 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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