DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and cdh15

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_997771.3 Gene:cdh15 / 565617 ZFINID:ZDB-GENE-030131-780 Length:792 Species:Danio rerio


Alignment Length:860 Identity:205/860 - (23%)
Similarity:341/860 - (39%) Gaps:215/860 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 TVVINV-----RDVNDNPPVFDRQTYRTQ--------ITEEDDRNLPKRILQVTAT---DGDVDR 169
            |:|..|     :..:.||.|.:...:|.:        ...|:.::||:.::|:.:.   .|:|  
Zfish    12 TIVCQVSSSRLKQSDANPAVLNPWRHRVKRDWIIPPIRVLENSKHLPEDLVQIKSDKIFTGEV-- 74

  Fly   170 PINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVG 234
                :|.|.|.|:|.|  ....|:|:..||.|...:||||::   ...::...||....||.|..
Zfish    75 ----IYMLEGPGVDQD--PKGLFEIDEKTGWIKSKEPLDREK---HKSFKLKAFALSPSGERLES 130

  Fly   235 YADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVI 299
            ...|::.:.|.|||.|:|.|..:.|.:.|....|:|||.::|||:|||: :.||.|.|||    |
Zfish   131 PTTIEIYVLDQNDNRPEFTQKEFIGTIPEFSVPGTSVMQVTAVDFDDPS-TDNAALSYSI----I 190

  Fly   300 EEETGAP------IFEIEPETGLIKTAVCCLDRERTPDY--SIQVVAMDGGGLKGTGTASIRVKD 356
            .:|...|      :|.|..:||:|......|||:....:  ::||..|.|.||..:..|.|.:.|
Zfish   191 GQECDPPHGINKTMFGINNKTGVIYIRDVGLDRDVVQSFRLTLQVADMSGMGLTSSSRAIIHISD 255

  Fly   357 LNDMPPQF---------TKDEWVTEVDETNGTYIPETPILTVTVQDEDETN----TFQYKVVPNS 408
            :|:..|:|         .:::.:.||...|.|             |:|:..    ..:|.:|..|
Zfish   256 INNHAPKFQPTTYNMYAMENKLIAEVGRVNAT-------------DKDQRGGDNWRIKYTIVNPS 307

  Fly   409 GFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVV 473
            |..|.:...|.|   .|.:.:::.||||     |...:.:.|  |.::.......|...:| ..|
Zfish   308 GHFAIRTDPVSN---QGIISVVKSLDYE-----SKAEYNLIV--KAENEVKLKSLYEQIHS-ATV 361

  Fly   474 KLRDINDN-VPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVR----------S 527
            .:|.:|:| .|.|.:..|:|::.|....||||....|.|.|   |:|:.::|::          |
Zfish   362 TVRVMNENEAPIFYKNPIKVTVPESVVPGTILVSDIAHDPD---HAKLRFEIIQDPDEWLAIDHS 423

  Fly   528 TNR---KRQFAISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPT 589
            |.:   |:.|        .|:.|..|  .:.:...:...|..:...:|||||.|.:.:.||..|.
Zfish   424 TGQIMAKKNF--------KIRSPFVR--NNIYSAVVKVTDQDADGISATATLEVNLWETNDYPPL 478

  Fly   590 FAQDYKPTLPENVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNEN 654
            ..........:....|..|.::|.|.|  :.....||||.   :|...:.|.:.:    ...||.
Zfish   479 LIPQSGTVCSDRDRDKLGLLLSALDED--MSPQADPFTFN---IADQNMAANWTI----ITLNET 534

  Fly   655 GVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI------GDVND-NKMQPGSK-- 710
            . |::..|...:|   ..::||:.:.|:|:|::..::.:.||:      ||... .....|||  
Zfish   535 H-AVLQPLVDIER---GEFSIPVVVSDSGSPSLYSSALVNVTVCPCDSFGDCKSITAAIFGSKIG 595

  Fly   711 ----------------------SVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQ---- 749
                                  :|.|.:...|:.... |.:.|...|| |:.|..::::.|    
Zfish   596 ISFIALMIIIGCIALLLVLLLLTVAVRSCTSQNIRKG-GGLLVGGSDD-DIRDNVFHYDEQGGGE 658

  Fly   750 -EHQRFKLD----------TDTGILTMRAGTRRGRYQLR--------FKVYDRE----------- 784
             :.:.|.:|          ..........|..||:..||        ...|.|:           
Zfish   659 EDEEAFNIDFLRSPSDMLPAPASFFPQDCGLPRGKQPLRKDAPHYLPSPTYPRKPSGDPTDIEDF 723

  Fly   785 --------HGQEDIPANLSVTVRDITAEAVQQAGSMRLSHIT--------DEDFVRTWNPVKNQV 833
                    ....::|...:..:.|...:. ..|||  ||.|.        |.|::..|.|     
Zfish   724 INVGLDAADNDPNVPPYDTALIYDYEGDG-SVAGS--LSSIASTGSDGDQDYDYLNDWGP----- 780

  Fly   834 EPSKLERFRNKLAEL 848
                  ||: |||.:
Zfish   781 ------RFK-KLANM 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 3/15 (20%)
Cadherin_repeat 140..248 CDD:206637 30/118 (25%)
Cadherin_repeat 256..359 CDD:206637 38/110 (35%)
CA 388..483 CDD:214520 23/99 (23%)
Cadherin_repeat 489..586 CDD:206637 28/109 (26%)
Cadherin_repeat 594..703 CDD:206637 25/115 (22%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
cdh15NP_997771.3 None
Blue background indicates that the domain is not in the aligned region.

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