Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_061761.1 | Gene: | PCDHB4 / 56131 | HGNCID: | 8689 | Length: | 795 | Species: | Homo sapiens |
Alignment Length: | 552 | Identity: | 144/552 - (26%) |
---|---|---|---|
Similarity: | 245/552 - (44%) | Gaps: | 89/552 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 191 KFDINRTTGDIFVLKPLDRDQPNGRPQ---WRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQF 252
Fly 253 PQGIYFGNVTENGTAGSSVMTMSAVDYD-----------DPNESTNAKLIYSIEKNVIEEETGAP 306
Fly 307 IFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIR--VKDLNDMPPQFTKDEW 369
Fly 370 VTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGDG----------T 424
Fly 425 GSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREH 489
Fly 490 IEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRETQD 554
Fly 555 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQ-DYKPTLPENVSGKKILEVAAKDPDDR 618
Fly 619 LRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNG 683
Fly 684 APAMTGTSTLTVTIGDVNDNK------MQPGS 709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 16/59 (27%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 26/115 (23%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 24/111 (22%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 28/96 (29%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 26/108 (24%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | |||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
PCDHB4 | NP_061761.1 | Cadherin_2 | 29..110 | CDD:285466 | 11/41 (27%) |
Cadherin_repeat | 139..237 | CDD:206637 | 27/113 (24%) | ||
Cadherin_repeat | 245..342 | CDD:206637 | 26/122 (21%) | ||
Cadherin_repeat | 354..446 | CDD:206637 | 28/92 (30%) | ||
Cadherin_repeat | 454..556 | CDD:206637 | 26/109 (24%) | ||
Cadherin_repeat | 575..663 | CDD:206637 | |||
Cadherin_C_2 | 684..767 | CDD:293101 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |