Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019288.2 | Gene: | pcdh1g18 / 554005 | ZFINID: | ZDB-GENE-050609-13 | Length: | 934 | Species: | Danio rerio |
Alignment Length: | 849 | Identity: | 207/849 - (24%) |
---|---|---|---|
Similarity: | 339/849 - (39%) | Gaps: | 207/849 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 PKRIL----QVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNG 214
Fly 215 RPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDY 279
Fly 280 DDPNESTNAKLIYSIEK------NVIEEETGAPIFEI---EPETGLIKTAVCCLDRERTPDYSIQ 335
Fly 336 VVAMDGGGLKGTGTASIR--VKDLNDMPPQFTKDEWVTEVDETNGTYIPE-TPILTVTVQDEDE- 396
Fly 397 TNTFQY---KVVP--NSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDD 456
Fly 457 GPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVA 521
Fly 522 --------YKIVRS-TNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLT 577
Fly 578 VIVKDVNDNAPTFAQD-YKPTLPE-NVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKA 640
Fly 641 G-FKVEYDRRG---------DNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTV 695
Fly 696 TIGDVNDNKMQPGSKSVLVYNYQGQSQDTPIGRVYVNDPD---------DWDVPDKKYYW----- 746
Fly 747 -EVQEHQRFKLDTDTG-ILTMRAGTRRGRYQLRFKVYDREHGQEDIPANLSVTVRDITAEAVQQA 809
Fly 810 GSMRLSHITDEDFVRTWNPVKN-------------------QVEPSKLERFR-NKL-----AEL- 848
Fly 849 -------LYTDRDNVDVFSVQLKEGSPYPLTDVHFAARSATQQPYFKAVRLN----GVVQMHREE 902
Fly 903 IEKD 906 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 21/97 (22%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 29/113 (26%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 25/108 (23%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 31/119 (26%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 16/92 (17%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
pcdh1g18 | NP_001019288.2 | Cadherin_2 | 31..113 | CDD:311943 | 16/80 (20%) |
Cadherin_repeat | 142..239 | CDD:206637 | 30/110 (27%) | ||
Cadherin_repeat | 247..343 | CDD:206637 | 27/119 (23%) | ||
Cadherin_repeat | 356..448 | CDD:206637 | 29/100 (29%) | ||
Cadherin_repeat | 456..558 | CDD:206637 | 31/120 (26%) | ||
Cadherin_repeat | 577..665 | CDD:206637 | 18/93 (19%) | ||
Cadherin_C_2 | 686..766 | CDD:318652 | 13/79 (16%) | ||
Cadherin_tail | 801..920 | CDD:318236 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |