DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and dchs1b

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_021327955.1 Gene:dchs1b / 553300 ZFINID:ZDB-GENE-050208-41 Length:3298 Species:Danio rerio


Alignment Length:2295 Identity:467/2295 - (20%)
Similarity:769/2295 - (33%) Gaps:750/2295 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WVLTNST--------YLVTKF---------------VRIGIADKNDSPPYFDRFLYETEIDENAD 50
            |:...|.        ||:|..               :|:.:.|:||:.|.|.:......:.||..
Zfish  1064 WLFVKSALDREVKDIYLLTVLATSGSGQMGRTGSATIRVSVTDENDNAPRFSQERVFLAVRENLP 1128

  Fly    51 LQSTVLTVNAKDHNESTNIRYQITGGNIGNAFAVQNTTGVIYVASPLDYETRPRYELRL---EAT 112
            ..:....|:|.|.:...|.|......:....|.:.:.||.|...:.||.|.:..|:|.:   :..
Zfish  1129 AGTGFGRVSATDRDAGLNSRLTYRLLHTDRYFQINSQTGEISTRAALDREHQSSYQLMVVVQDGG 1193

  Fly   113 RNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPIN--IVY 175
            ...::...|..|.|.|.|||.|.|.......:|..:....||...|..|....|.|...|  |.|
Zfish  1194 TPPRSATGTAHITVLDENDNAPAFSHTQPGREILIQVQEGLPAGSLLGTLNAKDPDEGENGTIFY 1258

  Fly   176 FLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGG----------- 229
            .|:|...:       :|.:|..||::....||.|.:   :.::.||:.|.|.|.           
Zfish  1259 SLSGSRAE-------RFSLNPNTGELRSSSPLRRAE---KAEYSFTITASDRGAPSQSSSAVLLI 1313

  Fly   230 ----------------------EG---------------------------LVGYAD-------- 237
                                  ||                           :||..|        
Zfish  1314 QVIGSTRISPKPNTLSMTLNSVEGAKPGSVIGSVRAHDQREVTLNGQVTYLVVGGTDHEGTFMVD 1378

  Fly   238 ----------------------------------------IQVNLKDINDNAPQFPQGIYFGNVT 262
                                                    :::|::|.||:|||||:......:.
Zfish  1379 RLTGDVYLARELDYEKGSRYTLQIEVDDFSKAYPNTHMIQLEINVQDSNDHAPQFPEDPVTIVIP 1443

  Fly   263 ENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRE 327
            ||..|||||.|..|.|.|  ....|:::.||:::...:   ...:|.::|.||::|.. ..||.|
Zfish  1444 ENTQAGSSVYTFQATDKD--GSGPNSEIRYSVQQRWPD---NPDLFNLDPVTGVLKLG-RELDHE 1502

  Fly   328 RTPDYSIQVVAMDGG-----GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPIL 387
            .|....:.|.|||..     .|.|:.||.:.|.|.||..|.|:....|:.:::....::    :|
Zfish  1503 ETSSLFLVVQAMDSALDPNQRLWGSVTARVFVTDENDNAPIFSSPTAVSVMEDQPVGFV----LL 1563

  Fly   388 TVTVQDED--ETNTFQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQV 450
            .|...|.|  |.....|::  .||..|.:|.:..|   :|||.|::|||.|   :...:...|..
Zfish  1564 YVMAWDADQGENGRVSYRI--QSGNTAGRFVLSSN---SGSLSILKPLDRE---EQESYNLTIVA 1620

  Fly   451 NDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQG 515
            .|.|       ...|.....:.:::.|:||..|.|:|...|..|.|:...||.:.|..|:|.|.|
Zfish  1621 EDHG-------IPQHSTTQVLSIQVIDVNDEAPWFERNEFEAQIRENQPAGTSIIQVTASDRDHG 1678

  Fly   516 GHSKVAYKIVRSTNRKRQFAI-SDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVI 579
            .:..|.|..|....    |.| ::.|.:|..|.||||.||.:.|.:.|.|.|.|...|.|.:.:.
Zfish  1679 TNGLVTYGGVTEDG----FTINAETGVISATRVLDRELQDHYTITVYAKDGGIPPNFAKAKVHIT 1739

  Fly   580 VKDVNDNAPTFA-QDYKPTLPENVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFK 643
            |.|.|||||.|. |.|...:|||:...::..:.|.|.|   .|..|...::        |||| .
Zfish  1740 VLDENDNAPAFGLQQYSLEVPENLQPVELFTLKATDRD---IGESGRLEYK--------IKAG-D 1792

  Fly   644 VEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPG 708
            .:.|.|.|..:|.  :|:.||.|||.:.||::.:.::|:|:|::..|:::.:::.|||||..:..
Zfish  1793 PDGDFRLDGSSGA--LSTSRPLDRERKSSYSLQVVVQDHGSPSLNSTASVEISVLDVNDNSPKFS 1855

  Fly   709 SKSVLVYNYQGQSQDTPIGRVYVN----DPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRA-G 768
            |.|..|    ..|:|..||.|.::    |.|:.......|:...:....|.:|.:||.:|..| .
Zfish  1856 SSSYTV----DVSEDAAIGLVVLDATATDVDEGQNGQILYFLSQEAKGAFTVDPNTGRITTAALL 1916

  Fly   769 TRRGRYQLRFKVY---------------------------------------------------- 781
            .|..|....|:||                                                    
Zfish  1917 DREKRASYFFQVYAVDLSPAAPRNSTAQVTVTILDVNDNAPFFIQDPLIINVSSGSVFTHQVVAT 1981

  Fly   782 ----DREHGQED-------IPA-------------------NLSVTVRDITAEAVQQAGSMRLS- 815
                |::.|...       :|.                   .|:.|.|.:..||:.|....:.| 
Zfish  1982 MRAEDKDFGANGSVFYRFAMPVRGFAINSLTGAIQTTENLQTLTQTQRTLIVEAMDQGSPPQSSL 2046

  Fly   816 -----HITDED-----FVRTWNPVKNQVEPSKLERFRNKLAELLYTDRD--NVDVFSVQLKEGSP 868
                 ::.::|     |.||...|..|....|........|:.....||  |..:||     |:.
Zfish  2047 GVVIIYVKEQDYKGIRFSRTARDVSLQENADKGTVVAQAQAQHPDGTRDGINYSIFS-----GNK 2106

  Fly   869 YPLTDVH-FAARSATQQPYFKA---------VRLNGVVQMHREEIEKDVGLNITMVNINE----- 918
            |     | |:..|.|.:.:.::         .||..||:.........:.:|:.:.::|:     
Zfish  2107 Y-----HSFSISSNTGEIWVQSSNGLDFEDTPRLRLVVKAETTSSSSFMAVNLILQDVNDNRPRF 2166

  Fly   919 -------CLHEGKG-------------KCGSN-SCTSKVELGKK-------PYTVSVNRTALVGV 955
                   .:||.:|             ..|.| ..|..:|...:       |.|.|:..||::..
Zfish  2167 QLQNYVTYMHEAQGYDFPIIQVVAEDVDQGQNGQVTYTIESSNQSGLFKIDPQTGSITTTAIMDR 2231

  Fly   956 RLDISAQCVCRARN----------------------------------------------FTHQD 974
            .:...|:.|.:|.:                                              .|..|
Zfish  2232 EIWTQAKLVIKATDRGSPKLVGTATITVIIVDLNDNSPTIPVPREVRVPENSLIGTEITLVTGND 2296

  Fly   975 HNCRTHLCYN--------GGRCVETRNGPKCVACPVGYNGPRCQQSTRSFRGNGWAWYP-PLQLC 1030
            .:....|.|:        |...::..||...:..|:.|     ::.|         ||. .::..
Zfish  2297 VDSGPVLSYSLQLDASTQGKFDIDRYNGRVSLTAPLDY-----EERT---------WYKLTIRAS 2347

  Fly  1031 QESHLSLEFITRVADGL---------ILYNGPIVPPKPEETVISDFIALELEQG------YPRLL 1080
            ...|.|...:|.|.:.:         .||...:....|..:.:....|.:.:.|      | |:|
Zfish  2348 DSKHQSEANLTVVVEDVNDNVPTFTQDLYQVTLPEHSPPGSPVITVTATDRDSGENGKVSY-RVL 2411

  Fly  1081 --------IDFGSGTLELRVKTKKTLDDGVWHRLDIFWDTENVRMVVDFCRTALVSEMEDGTPPE 1137
                    :|..:|||.:|.|.|              :|.|...:       ::|.|..||..|.
Zfish  2412 SSTRDGFYVDPKNGTLFIRQKAK--------------FDPEEPSV-------SIVIEARDGGSPP 2455

  Fly  1138 FDDNACQARGQIPPFAESLNLNQPLQLGGLYRQHFDQTLYNWQY----AFSSKGFDGCIRNVIHN 1198
            ...:|     .:......:|.|.|:    .::..:..|:...|.    ..:.:..||   ::...
Zfish  2456 LSSSA-----TVQVQLMDVNDNAPI----FHQLEYKATVSEDQLPGATILTLEAVDG---DLSQE 2508

  Fly  1199 SEHYDLAFPA-LARNSFPACPQTDEVCLKTEHTARCWE-HG-NCVASLV-------QAKCH---- 1249
            :..:|.|..: ...|:|           :.|.:.|..| || ..|.:|:       :|..|    
Zfish  2509 NSGFDFAIASGNVGNAF-----------QIESSVRFIEGHGFQTVGTLILAERLDFEALSHYNLT 2562

  Fly  1250 ---CQPGWMGPGCNVPTI---------PTTFKAQSY----------------------------- 1273
               ...|......:||.|         |..|....|                             
Zfish  2563 VSVSDRGVPQRSSSVPAIITVTDVNDNPPVFGRAEYIVALSEGAAAGAEILRVTATDPDSAPYAE 2627

  Fly  1274 VKFALS-------FEPDRFSTQLQLRFRTREQGGELFRVSDQHHREYAILELRRGHLQFRY---- 1327
            |::::|       |..|:::..::|:       ..|.|.|...|  ..|::...||.:|..    
Zfish  2628 VQYSISSGDDMKLFSVDQWTGAMKLQ-------RPLDRESQNSH--VVIVQASDGHGRFALAPIS 2683

  Fly  1328 ----NLNSMRNEEQLLTLTAIAVNDGQ--------WHVIRISR--YGSAALMELD---------- 1368
                ::|..|....:.|||| ::.:.|        .|.|....  ||......:|          
Zfish  2684 VEVKDINDNRPYFPIATLTA-SIRENQPLNSAVTVLHAIDYDTGVYGQLKYYLMDHSSPGKDLFF 2747

  Fly  1369 ----GGESRRYN-------ESFHF------TGHQWLTIDKQEGVYAGGKAEYTGIKT-----FEV 1411
                .||.|...       .||:|      .|:...|:..|  |:..|:.||..:.|     |||
Zfish  2748 VDQNSGEVRTKQIFDFEKVNSFNFIALAVDAGNNSATVTVQ--VFITGEDEYDPVFTTSDLSFEV 2810

  Fly  1412 QSDFQRSCLDDIRLDGKHLPLPPAMNGTQWGQATMARNLERNCPSNRPCSNVICPDPFD------ 1470
            ....::         |:.:.|..|.:........:..:...:.|.            ||      
Zfish  2811 PEGAKK---------GQSIGLVQAKDEDGGVDGIVLYSFPNSSPY------------FDVNKTTG 2854

  Fly  1471 CVDLWNEYECTCSEG-------RIMSSDTKGCVDRNECLDLPCLNGATCINLEPRLRYRCICPEG 1528
            .:.|..:...:.|.|       |:|:.|    |..:..||...:..|..|             ..
Zfish  2855 VIYLKMDNSGSSSGGSRSKRETRLMTMD----VSAHSPLDTSRVASAQVI-------------ID 2902

  Fly  1529 YWGENCELVQEGQRLKLSMGALGAIFVCLIIILILALIFVLYSRKRK------------TTKKK- 1580
            ....:..|..:...|.:|:.|.....:.|::|:.:||..|...||:|            |..:| 
Zfish  2903 VTNTSFGLATDFNILLVSIIAASLGVIVLLVIIAVALYLVRSKRKKKGQDAGNSTASSGTALQKL 2967

  Fly  1581 ---KRSGPEKDVRETVISY--EDEGGGEDDMT---AFDITPLQIPISAQGGPPDIAACKMPIIYP 1637
               |.||.::...:.:..|  ::||.|....|   :.|.:......||:....|  ..:|...||
Zfish  2968 DESKPSGSDRIYHQALPGYAGDEEGTGAGSYTRGGSLDPSHSSGRGSAEAAEDD--EIRMINEYP 3030

  Fly  1638 VMTLLPPGQELNVAY------LMEERKQRIDKDNNAPPFDDLRNFTFEGSGSIAESLS-SLASG- 1694
            .:..:....:.:::.      :.::..|..|......|.|..:.|..:..|||:.||| :|.|| 
Zfish  3031 RVASITSSMQEHISARGPDSGIQQDADQLSDISCEPGPLDASQWFKSKKLGSISGSLSGTLLSGQ 3095

  Fly  1695 ---------------------------------------------TDDE---NQDFNYLQNWGPR 1711
                                                         :|:|   :.:::||.||.|:
Zfish  3096 LPVYRDEGGGYLGVGRGLNISHPKDYAFPEDGKPPVDGSLTAIVASDEELRGSYNWDYLLNWCPQ 3160

  Fly  1712 FNALAAMYVHDKAKASSQLP 1731
            |..||:::..........||
Zfish  3161 FQPLASVFTEIARLKDESLP 3180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637 21/93 (23%)
Cadherin_repeat 140..248 CDD:206637 32/217 (15%)
Cadherin_repeat 256..359 CDD:206637 33/107 (31%)
Cadherin_repeat 379..481 CDD:206637 25/103 (24%)
Cadherin_repeat 489..586 CDD:206637 34/97 (35%)
Cadherin_repeat 594..703 CDD:206637 32/108 (30%)
Cadherin_repeat 724..801 CDD:206637 23/163 (14%)
EGF_CA 977..1010 CDD:238011 7/40 (18%)
LamG 1013..1198 CDD:238058 37/212 (17%)
EGF_2 <1233..1259 CDD:285248 8/41 (20%)
Laminin_G_2 1293..1428 CDD:280389 37/184 (20%)
EGF_CA 1497..1535 CDD:238011 4/37 (11%)
Cadherin_C 1583..1719 CDD:279398 38/196 (19%)
dchs1bXP_021327955.1 Cadherin_repeat 50..140 CDD:206637
Cadherin_repeat 150..252 CDD:206637
Cadherin_repeat 261..359 CDD:206637
Cadherin_repeat 375..469 CDD:206637
Cadherin_repeat 478..576 CDD:206637
Cadherin_repeat 585..683 CDD:206637
Cadherin_repeat 692..783 CDD:206637
Cadherin_repeat 796..891 CDD:206637
Cadherin_repeat 905..995 CDD:206637
Cadherin_repeat 1005..1110 CDD:206637 8/45 (18%)
Cadherin_repeat 1123..1213 CDD:206637 21/89 (24%)
Cadherin_repeat 1228..1316 CDD:206637 23/97 (24%)
Cadherin_repeat 1336..1429 CDD:206637 8/92 (9%)
Cadherin_repeat 1437..1540 CDD:206637 34/108 (31%)
Cadherin_repeat 1550..1643 CDD:206637 25/111 (23%)
Cadherin_repeat 1652..1746 CDD:206637 34/97 (35%)
Cadherin_repeat 1754..1850 CDD:206637 32/109 (29%)
Cadherin_repeat 1858..1955 CDD:206637 21/100 (21%)
Cadherin_repeat 1977..2054 CDD:206637 10/76 (13%)
Cadherin_repeat 2070..2162 CDD:206637 21/101 (21%)
Cadherin_repeat 2171..2267 CDD:206637 15/95 (16%)
Cadherin_repeat 2274..2358 CDD:206637 14/97 (14%)
Cadherin_repeat 2376..2472 CDD:206637 23/122 (19%)
Cadherin_repeat 2480..2589 CDD:206637 21/122 (17%)
Cadherin_repeat 2597..2692 CDD:206637 15/103 (15%)
Cadherin_repeat 2702..2796 CDD:206637 19/96 (20%)
Cadherin_repeat 2807..2904 CDD:206637 20/134 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100175
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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