Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008768930.1 | Gene: | Cdh24 / 498515 | RGDID: | 1560161 | Length: | 781 | Species: | Rattus norvegicus |
Alignment Length: | 579 | Identity: | 171/579 - (29%) |
---|---|---|---|
Similarity: | 285/579 - (49%) | Gaps: | 73/579 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 PKRILQVTATDGDVDR-PINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQ 217
Fly 218 WRFTVFAQDE-GGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDD 281
Fly 282 PNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD----GG 342
Fly 343 GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED--ETNTFQYKVV 405
Fly 406 PNSGFGADKFAMVRNGDG-TGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDD------GPGGSDK 463
Fly 464 YHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRST 528
Fly 529 NRKRQFAIS-DRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQ 592
Fly 593 DYKPTLPENVS-GKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGV 656
Fly 657 AIISSLRPFDREA---QKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQP-GSKS 711 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 29/95 (31%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 34/106 (32%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 24/110 (22%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 23/97 (24%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 35/112 (31%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | |||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
Cdh24 | XP_008768930.1 | CA | 70..148 | CDD:214520 | 29/86 (34%) |
Cadherin_repeat | 154..255 | CDD:206637 | 35/107 (33%) | ||
Cadherin_repeat | 264..368 | CDD:206637 | 27/117 (23%) | ||
Cadherin_repeat | 378..475 | CDD:206637 | 23/97 (24%) | ||
Cadherin | 483..577 | CDD:421759 | 35/112 (31%) | ||
Cadherin_C | 625..776 | CDD:395833 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 130 | 1.000 | Domainoid score | I5067 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |