Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001009590.2 | Gene: | pcdh2ab11 / 493599 | ZFINID: | ZDB-GENE-041118-10 | Length: | 940 | Species: | Danio rerio |
Alignment Length: | 1163 | Identity: | 251/1163 - (21%) |
---|---|---|---|
Similarity: | 406/1163 - (34%) | Gaps: | 370/1163 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 RFLYETEIDENADLQSTVLTVNAKDHNESTNIR------YQITGGNIGNAFAVQNTTGVIYVASP 96
Fly 97 LD----YETRPRYELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLP--- 154
Fly 155 KRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDIN-------RTTGDIFVLKPLDRDQP 212
Fly 213 NGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAV 277
Fly 278 DYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGG 342
Fly 343 GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPN 407
Fly 408 SGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYH--VAYSW 470
Fly 471 VVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFA 535
Fly 536 ISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTL-- 598
Fly 599 --PENVS-GKKILEVAAKDPDDRLRGNGGPFTFR-LDPLASDEIKAGFKVEYDRRGDNENGVAII 659
Fly 660 SSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVLV-YNYQG--QS 721
Fly 722 QDTP--------IGRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRF 778
Fly 779 KVYDR------------EHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKN 831
Fly 832 QVEPSKLERFRNKLAELLYTDRDNVDVFSVQL----------------KEGSPYPLT--DVHFAA 878
Fly 879 RSATQQPYFKAVRLNGVVQMHREEIEKDVGL--------NITMVNINECLHEGKGKCGSNSCTSK 935
Fly 936 VELGKKP----------YTVSVNRTALVGVRLDISAQCVCRARNFTHQDHNCRTHLCYNGGRCVE 990
Fly 991 TRNGPKCVACPVGYNGPRCQQSTRSFRGNGWAW-YPPLQLCQESHLSLEFITRVADGLILYNGPI 1054
Fly 1055 VPP--KPEETVISDFIALELEQGYPRLL--------------IDFGSGTLELRVKTKK 1096 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | 28/100 (28%) |
Cadherin_repeat | 140..248 | CDD:206637 | 28/117 (24%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 18/102 (18%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 21/103 (20%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 30/96 (31%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 28/114 (25%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 14/96 (15%) | ||
EGF_CA | 977..1010 | CDD:238011 | 6/32 (19%) | ||
LamG | 1013..1198 | CDD:238058 | 21/101 (21%) | ||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
pcdh2ab11 | NP_001009590.2 | Cadherin_2 | 28..108 | CDD:311943 | 24/84 (29%) |
Cadherin_repeat | 137..236 | CDD:206637 | 25/110 (23%) | ||
Cadherin_repeat | 245..344 | CDD:206637 | 39/225 (17%) | ||
Cadherin_repeat | 356..449 | CDD:206637 | 30/92 (33%) | ||
Cadherin_repeat | 457..558 | CDD:206637 | 27/111 (24%) | ||
Cadherin_repeat | 576..659 | CDD:206637 | 14/97 (14%) | ||
Cadherin_C_2 | 686..758 | CDD:318652 | 12/80 (15%) | ||
Cadherin_tail | 795..912 | CDD:318236 | 27/165 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |