Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001009592.2 | Gene: | pcdh2ab2 / 493588 | ZFINID: | ZDB-GENE-041118-2 | Length: | 944 | Species: | Danio rerio |
Alignment Length: | 780 | Identity: | 203/780 - (26%) |
---|---|---|---|
Similarity: | 318/780 - (40%) | Gaps: | 197/780 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 DPLKIFWV-----LTNSTYLVTKFVRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKD 62
Fly 63 HNESTNIR------YQITGGNIGNAFAVQNTTGVIYVASPLDYE----TRPRYELRLEATRNRKN 117
Fly 118 NYTTVVINVRDVNDNPPVF---------DRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI 173
Fly 174 V--YFLTGQGIDPDNPANSKFDIN-RTTGD------IFVLKPLDRDQPNGRPQWRFTVFAQDEGG 229
Fly 230 EGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSI 294
Fly 295 EKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTAS------IR 353
Fly 354 VKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED--ETNTFQYKVVPNSGFGAD--- 413
Fly 414 --KFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLR 476
Fly 477 DINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGA 541
Fly 542 VSIQRPLDRETQDRHHIQ-------------ILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD 593
Fly 594 YK---PTLPENV-----SGKKILEVAAKDPD-----------DRLRGNGGPFTFRLDPLASDEIK 639
Fly 640 AGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI----GDV 700
Fly 701 700 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | 25/100 (25%) |
Cadherin_repeat | 140..248 | CDD:206637 | 32/116 (28%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 36/108 (33%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 25/108 (23%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 27/109 (25%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 27/130 (21%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | |||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
pcdh2ab2 | NP_001009592.2 | Cadherin_2 | 32..112 | CDD:311943 | 21/84 (25%) |
Cadherin_repeat | 141..240 | CDD:206637 | 33/123 (27%) | ||
Cadherin_repeat | 249..348 | CDD:206637 | 37/108 (34%) | ||
Cadherin_repeat | 360..453 | CDD:206637 | 28/115 (24%) | ||
Cadherin_repeat | 461..562 | CDD:206637 | 27/109 (25%) | ||
Cadherin_repeat | 580..663 | CDD:206637 | 22/107 (21%) | ||
Cadherin_C_2 | 690..762 | CDD:318652 | |||
Cadherin_tail | 799..916 | CDD:318236 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |