DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and LOC4577533

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_001238323.3 Gene:LOC4577533 / 4577533 VectorBaseID:AGAMI1_000981 Length:642 Species:Anopheles gambiae


Alignment Length:529 Identity:151/529 - (28%)
Similarity:235/529 - (44%) Gaps:74/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   701 NDNKMQPGSKSVL----VYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWE--VQEHQR--FKLD 757
            :|:.:|..:.|||    ||||.|...|..||||.::..:    .||...|:  |.:..|  |:::
Mosquito    53 HDSSVQVTTGSVLTHITVYNYNGAISDAAIGRVSLDSSN----MDKICQWDDTVSQASRRYFEIN 113

  Fly   758 TDTGILTMRAGTRRGRYQLRFKVYDR--EHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDE 820
            ..|||:|||.||..|.|.|.|.|.:|  :..:..|...:.|||:.:..:.:.::||:|..::|.|
Mosquito   114 DSTGIITMREGTPEGIYLLHFIVTERFNDASKYKISKKVKVTVKKVLKKHIDRSGSIRFLNVTGE 178

  Fly   821 DFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDNVDVFSVQ-LKEGSPYPLTDVHFAARSATQQ 884
            ..:..    :.....:..||....:|..|...:|.|.:||:| .|:.:...:.:|.:......|.
Mosquito   179 QILAK----EKGSSTAPKERLEMSIASALNVTQDKVVIFSIQNEKDQTNQTILNVRYLVHGLLQS 239

  Fly   885 PYFKAVRLNGVVQMHREEIEKDVGLNITMVNINECLHEGKGKCGS-NSCTSKVELGKKPYTVSVN 948
            .|.... ||.|:...::.:|:.||..:..|.|:||:   ...|.. :.|.||..:...|.|:...
Mosquito   240 EYLPEF-LNTVLTGRKQTLEQIVGFPVLQVGIDECI---PNSCSEYHFCNSKFHVSSTPITIHTE 300

  Fly   949 RTALVGVRLDISAQCVCRARNFTHQDHNCRTHLCYNGGRCVETRNGPKCVACPV--GYNGPRCQQ 1011
            ..|..||.:.:..:||.|           :...|.|||..|:..       |..  |:.||:|::
Mosquito   301 GNAFTGVNVTVQKECVDR-----------KIITCLNGGSPVDDH-------CSYLKGFEGPKCEK 347

  Fly  1012 STRSFRGNGWAWYPPLQLCQESHLSLEFITRVADGLILYNGP-IVPPKPEETVISDFIALELEQG 1075
            ...||..||:|.||.:.....:.:|:|......|||:||.|| ||...||...: :|:||||...
Mosquito   348 IEISFEENGYAIYPLIDPGNTTSISMELAPNSEDGLVLYIGPWIVDHNPEAPAL-EFLALELIAK 411

  Fly  1076 YPRLLIDFGSGTLELR---VKTKKTLDDGVWHRLDIFWDTENVRMVVDFCRTALVSEMEDGTPPE 1137
            .|.|....|.....||   |:.:.:..      ::|....:.::::||..:... |...|.....
Mosquito   412 RPVLWFGVGGNIERLRHPSVQQRNSFS------IEIVIFPDMIQLIVDGYKMRF-STSRDARVKH 469

  Fly  1138 FDDNACQARGQIPPFAESLNLNQPLQLGGLYRQHFDQTLYNWQYAFSSKGFDGCIRNVIHNSEHY 1202
            | .|:....|.     .|:.||   |||         ..:||.....||||.|.|||:..|:..|
Mosquito   470 F-TNSILHLGD-----SSIYLN---QLG---------ARFNWTDVAQSKGFAGTIRNLKINNRTY 516

  Fly  1203 DLAFPALAR 1211
            ||..|.||:
Mosquito   517 DLGQPILAK 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637
Cadherin_repeat 256..359 CDD:206637
CA 388..483 CDD:214520
Cadherin_repeat 489..586 CDD:206637
Cadherin_repeat 594..703 CDD:206637 0/1 (0%)
EGF_CA 977..1010 CDD:238011 9/34 (26%)
LamG 1013..1198 CDD:238058 55/188 (29%)
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
LOC4577533XP_001238323.3 None
Blue background indicates that the domain is not in the aligned region.

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