Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001003983.1 | Gene: | cdh5 / 445471 | ZFINID: | ZDB-GENE-040816-1 | Length: | 767 | Species: | Danio rerio |
Alignment Length: | 772 | Identity: | 187/772 - (24%) |
---|---|---|---|
Similarity: | 292/772 - (37%) | Gaps: | 183/772 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 175 YFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFA---QDEGGEGLVGYA 236
Fly 237 DIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEE 301
Fly 302 ETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDG----GGLKGTGTASIRVKDLNDMPP 362
Fly 363 QFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGDGTGSL 427
Fly 428 KIIQPLDYEDPLQSSGFRFRIQVND----KGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDRE 488
Fly 489 HIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISD----------RGAVS 543
Fly 544 IQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVSGKKIL 608
Fly 609 -EVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKS 672
Fly 673 YAIPIEIKDNGAP---------------------------AMTGTST-------------LTVTI 697
Fly 698 GDVNDNKMQPGSKSVLVYNYQGQSQDTPI-------GRVYVNDPDDWDVP-------DKKY---- 744
Fly 745 ----YWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDREH-----GQEDIPANLSVTVRD 800
Fly 801 ITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDNVD 857 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 22/75 (29%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 30/106 (28%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 24/105 (23%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 23/106 (22%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 33/149 (22%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 19/103 (18%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
cdh5 | NP_001003983.1 | CA | 86..153 | CDD:214520 | 24/77 (31%) |
Cadherin_repeat | 160..257 | CDD:206637 | 31/105 (30%) | ||
Cadherin_repeat | 266..369 | CDD:206637 | 26/115 (23%) | ||
Cadherin_repeat | 377..471 | CDD:206637 | 23/106 (22%) | ||
Cadherin_repeat | 480..571 | CDD:206637 | 26/103 (25%) | ||
Cadherin_C | 619..757 | CDD:366437 | 36/170 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |