DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and Cad89D

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster


Alignment Length:1448 Identity:306/1448 - (21%)
Similarity:503/1448 - (34%) Gaps:467/1448 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 DDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPL----DR 209
            :|..:.|.||::.|.......       |.|.....|:...:..:.|.||..:.:.:.|    ||
  Fly    80 EDAQVGKEILRLQAYPRSTAA-------LKGADASGDHKYFNLTEHNATTLVVSLARSLERLVDR 137

  Fly   210 DQPNGRPQWRFTVFA-QDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMT 273
            |.|....::|..... |::..||  .|..|.|.::|:|||||:|....|..:|.||.:..|.:..
  Fly   138 DVPRNLLKFRILCAGKQEKLEEG--SYLSITVYIEDVNDNAPEFLNVPYVVDVDENTSIESIIFE 200

  Fly   274 -MSAVDYDDPNESTNAKLIYSIEKNVIEEE---TGAPIFEIE-PETGLIKTAVCCLDRERTPD-- 331
             :.|.|.|.|| :.|:::.:|:  :.:.|:   .|:|.|.:: |...|:     .|.||...|  
  Fly   201 GVQAFDRDKPN-TPNSEVHFSM--STVPEQLSADGSPYFALKSPHRPLL-----ILKRELDFDNG 257

  Fly   332 ---YSIQVVAMDGG--GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPET------- 384
               :.:.:.|.|.|  ..:...|.:|.|:|::|:||:||:..:.|.::|    :.|.|       
  Fly   258 IRQFKLPIFAWDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINE----FYPMTGVPIRIP 318

  Fly   385 -----PILTVTVQDEDETN-TFQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSG 443
                 ||:..   |:|..| :..|.::  ||   ::..:.|.....|.:.:.:.:|.|:. ...|
  Fly   319 LYFAPPIMAF---DQDSLNASLVYDII--SG---NERQLFRVNPHNGVMYLQKEIDLEEE-SLPG 374

  Fly   444 FRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFK 508
            ..|.:|:..:..|.|     ...|.:.:.|::.|:|||||:|:.::..:||.|:...|..:.|..
  Fly   375 NTFVLQLEARQKDNP-----LKKALARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVN 434

  Fly   509 ATDADQGGHSKVAYKIVRSTNRKRQFAISDR-GAVSIQ--RPLDRETQDRHHIQILA-------- 562
            |.|.|||.:|:..|.:|.:.:....|.|..| |.::::  |.||||  .|..||:..        
  Fly   435 AVDRDQGENSEFLYNLVETKDAAGAFRIDSRTGWITVRDDRLLDRE--QRRSIQLNVEALERNPS 497

  Fly   563 -IDDGSPARTATATLTVIVK--DVNDNAPTFAQD--YKPTLPENV-SGKKILEVAAKDPDDRLRG 621
             :||....:...:.:.|.:.  |.|||.|.|...  |:..:|.|. :|..|.:|.|.|||:   |
  Fly   498 YLDDKHLKKPGPSKVQVEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDE---G 559

  Fly   622 NGGPFTFRLD-PLASDEIKAGFKVEYDRRGDNENGVAIISS-LR----------------PFDRE 668
            ..|...:.|. |..|..|.  |::      ||:||...:.. ||                |.:|.
  Fly   560 PNGHLLYELQRPKGSGYIP--FRL------DNKNGTIYVGGPLRRGRIAVFVEATDQPTNPSERR 616

  Fly   669 AQKSYAIPIE----IKDN-----GAP--AMTGTST-LTVTIGDVNDNKMQPGSKSV---LVYNYQ 718
            ...: .|.||    |.|.     |||  ...|.:| |..::|.|....:..|...:   |::.| 
  Fly   617 FSLA-VITIEVYATIDDQAIDFVGAPYEFWVGANTPLGTSVGQVRTTLIYEGGDEIMYDLLHTY- 679

  Fly   719 GQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDR 783
              |:..|                            |.::..:||:|:    .|...:.:.|||..
  Fly   680 --SEGVP----------------------------FAIEERSGIITV----IRELSEFKRKVYQF 710

  Fly   784 EHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAEL 848
            |.....:.||.|              .|:.:|        |:.:|:.....|::|..     ..:
  Fly   711 EAVANYLFANSS--------------QSLVMS--------RSSSPLTTIASPAELSD-----EGV 748

  Fly   849 LYTDRDNVDVFSVQLKEGSPYPLTDVHFAARSATQQPYFKAVRLNGVVQMHREEIEKDVGLNITM 913
            |.|   |:.:..|. |.....||            :|..:.:.:| |:..|.||       |:..
  Fly   749 LIT---NLTIHIVN-KPEQKVPL------------RPVIEEINMN-VIHFHVEE-------NVVG 789

  Fly   914 VNINECLHEGKGKCGSNSCTSKVELGKKPYTVSVNRTALVGVRLDISAQCVCRARNFTHQDHNCR 978
            ..|.:.|::......:|...:..|:..:|    .:|...:|.|.        |:||.:       
  Fly   790 GIIGQLLYKNGINLVNNELGTYREMPSEP----TSRNITMGSRF--------RSRNRS------- 835

  Fly   979 THLCYNGGRCVETRNGPKCVACPVGYNGPRCQQSTRSFRGNGWAWYPPLQLCQESHLSLEF---- 1039
                                         |..:|.|..         |.:|..::::.|.:    
  Fly   836 -----------------------------RSSKSKRRL---------PRRLVGDANIKLRYIIAN 862

  Fly  1040 -------ITRVADGLILYNGPI---VPPKPEETVISDFIALELEQGYPRLLIDFGSGTLELRVKT 1094
                   |:...||.:|....:   ..|..|.|||.:         |...|:. |:|..::.:|.
  Fly   863 QQEVVNKISITEDGTLLTLTGLDREQQPSYELTVIVE---------YSTGLVS-GAGIYQVNIKV 917

  Fly  1095 KKTLDDGVWHRLDIFWDTENVRMVV----DFCRTALVSEMEDGTPPEFDDNACQARGQIPPFAES 1155
            ....|:........:....|...||    ......|:.:.::|...||                 
  Fly   918 DDVNDNAPKFNALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEF----------------- 965

  Fly  1156 LNLNQPLQLGGLYRQHFDQTLYNWQYAFSSKGFDGCIRNVIHNSEHYDLAFPALARNSFPACPQ- 1219
                 .:||.|.|...|.....|   ..||:           ||.|:.:.....|.|.|....| 
  Fly   966 -----RVQLQGDYSDEFSIEYVN---GTSSE-----------NSTHHKMPSTTGAFNIFNLTDQW 1011

  Fly  1220 TDEVCLKTEHTARCWEHGNCVASLVQAKCHCQPGWMGPGCNVPTIPTTFKAQSYVKFALSFEP-- 1282
            .||...:..||.                               .:.|.||..|...|.:|:..  
  Fly  1012 NDEFKYQELHTT-------------------------------FMQTNFKLSSGPYFRISYTGKR 1045

  Fly  1283 --DRFSTQL-QLRFRTREQGGELFRVSDQHHREYAILELRRGHLQFRYNLNSMRNEEQLLTLTAI 1344
              ||...|| .|:....:.||    :|...|                            ||:...
  Fly  1046 GLDREKQQLYNLKIIAADTGG----LSGYAH----------------------------LTVLVA 1078

  Fly  1345 AVNDGQWHVIRISRYGSAALMELDGGESRRYN--------ES-------------------FHFT 1382
            .|||......|||.:..:.|      |.|.|.        ||                   :|..
  Fly  1079 DVNDNAPMFERISVFKDSRL------EIREYTTDMEIYFVESSSGMTAPQATAAMMLAPPPYHIP 1137

  Fly  1383 GHQWLTIDKQEGVYAG----GKAEY----------------------TGIKTFEVQS---DFQRS 1418
            |.....:|::..|.||    .:|:.                      .|.|..::.:   ||.::
  Fly  1138 GSPRFNVDRERSVGAGLGVVARAKSRRRMVRALTTKCPLFAIYEDTPVGTKVLQLSASDEDFGKN 1202

  Fly  1419 CLDDIRLDGKHLPLPPAM 1436
            .|....|.|:.:...|.|
  Fly  1203 ALLHYELQGEQVERTPGM 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 25/103 (24%)
Cadherin_repeat 256..359 CDD:206637 29/114 (25%)
Cadherin_repeat 379..481 CDD:206637 23/114 (20%)
Cadherin_repeat 489..586 CDD:206637 30/110 (27%)
Cadherin_repeat 594..703 CDD:206637 38/139 (27%)
Cadherin_repeat 724..801 CDD:206637 13/76 (17%)
EGF_CA 977..1010 CDD:238011 1/32 (3%)
LamG 1013..1198 CDD:238058 34/202 (17%)
EGF_2 <1233..1259 CDD:285248 0/25 (0%)
Laminin_G_2 1293..1428 CDD:280389 31/190 (16%)
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 29/114 (25%)
Cadherin_repeat 325..407 CDD:206637 20/95 (21%)
Cadherin_repeat 416..524 CDD:206637 30/109 (28%)
Cadherin_repeat 534..626 CDD:206637 27/103 (26%)
Cadherin_repeat 641..>714 CDD:206637 20/107 (19%)
CA 851..925 CDD:214520 16/83 (19%)
CA 1026..1085 CDD:214520 20/90 (22%)
Cadherin_repeat 1177..1280 CDD:206637 9/44 (20%)
Cadherin_repeat 1289..1385 CDD:206637
Cadherin_repeat 1414..1510 CDD:206637
CA 1576..1658 CDD:214520
Cadherin_repeat 1666..1760 CDD:206637
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464698
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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