DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and Cdh26

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_941058.1 Gene:Cdh26 / 381409 MGIID:2685856 Length:763 Species:Mus musculus


Alignment Length:766 Identity:185/766 - (24%)
Similarity:324/766 - (42%) Gaps:153/766 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 QITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDI-NRTTGDIFVLKPL 207
            ::.|||....||.:.::.   .::...::::|.:.|.|:| :.|....|.| :..:|.|:|.:|:
Mouse    37 ELQEEDPGPFPKLVGELF---NNMSNNVSLIYLIRGPGVD-EFPEIGLFSIEDHQSGKIYVHRPV 97

  Fly   208 DRDQPNGRPQWRFTVFAQDEG-----GEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTA 267
            ||:.   .|.:.....|.|..     .|.|:    ..:.::|:||:|||||:..:..:|.|:..|
Mouse    98 DREV---TPSFMVHFDAVDRSTGKVVDESLI----FNIRIRDVNDHAPQFPEKEFNISVKESQAA 155

  Fly   268 GSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDY 332
            |..:..:..||.|..|...:..|.:.:.:..:..|:|   |.|:..:|.::.: .||..|..|.:
Mouse   156 GQPIFQLLTVDLDQENTPNSQVLYFLVSQTPLLRESG---FRIDLISGEVRLS-GCLHYETAPLF 216

  Fly   333 SIQVVAMDGG--GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED 395
            ::.|.|.|.|  .|..|.|..:.|:|.|:..|.|.:|.:...:.|..    .|..:|.:.|||.|
Mouse   217 TLIVRASDCGEPSLTSTATIHVSVEDSNNHMPTFMEDRYEIRISEGQ----VEQGVLYLPVQDGD 277

  Fly   396 ETNTFQYKVVPNSGFGADK--FAMVRNGD-GTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGD-- 455
            ...|..::...|...|.::  |.:|.:.: ..|.|.||:|||||..:..|   ..:.|.::..  
Mouse   278 SPFTPAWRTQFNIWDGNEEGHFDIVTDPETNQGLLSIIKPLDYESQVAHS---LVVVVENQEQLF 339

  Fly   456 ---DGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGH 517
               :|.....:..:|.:.|.|::.|.|| .|.|..:...||..:.......|..|.|||.|: ..
Mouse   340 VCTEGQLQPLRKAMASTMVSVQVLDTND-PPAFHPQSFIVSEEDGAWPAIQLGYFNATDPDR-AD 402

  Fly   518 SKVAYKIVRSTNRKRQFAISDR-GAVSIQRPLDRET----QDRHHIQILAIDDGSPARTATATLT 577
            |::.||:|.  :.:....:.:: |.|:.::.:|||:    ...:.|.:.|:|:|.|..|.|.||.
Mouse   403 SQIRYKLVH--DPENWVTVDEKSGVVTTKKQIDRESPHVNDSFYTIIVHAVDNGLPPLTGTGTLM 465

  Fly   578 VIVKDVNDNAPTFAQDYKPTLPENVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGF 642
            :.:.||||||||.....:.......:|.:.|.:.|:|.|  |.....||||.||. |..:::..:
Mouse   466 LFLSDVNDNAPTLRPHSRHLEVCESAGSQPLLIEAEDAD--LDPYADPFTFDLDN-AQGDVEETW 527

  Fly   643 KVEYDRRGDNENG-VAIISSLRPFDREAQKSYAIPIEIKDN------------------------ 682
            .:. .::|:..:. :.::.|:.|.|      |.:|:.|.|.                        
Mouse   528 MLR-TKQGEGHSAELTMLRSVPPGD------YLVPLFIADRQGLAQKQTVHVRICSCRSGSECEE 585

  Fly   683 --------------GAPAMTGTSTL------TVTIGDVNDNKMQP---GSKSVLVYNYQ-----G 719
                          ||..|..::.|      :.|.|........|   |.::::|||.:     .
Mouse   586 PSDTWLLWWALSPVGAALMVLSAALLCLLRCSCTFGPKRLRGFIPSDSGHQTLIVYNEESKVPSA 650

  Fly   720 QSQDT---PIG--------RVYVNDPDDWDVPDKK----------YYWEVQEHQRFKLDTDTGIL 763
            |..||   |.|        .||:    |..||.::          ..|..:......|:.|||.|
Mouse   651 QGCDTFFEPRGVKTLLSSTPVYL----DRMVPRQQPLQLLEGRVVEAWSQKLQSIDVLEGDTGYL 711

  Fly   764 TMRAGTRRGRYQLRFKVYDREHGQ---EDIPANLSVTVRDITAEAVQQAGS 811
            .              .|| ||.|:   .:..::|:...:|::.:.:..:||
Mouse   712 P--------------HVY-REEGECEGAETLSSLTFLEQDLSPKLLGCSGS 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 25/109 (23%)
Cadherin_repeat 256..359 CDD:206637 27/104 (26%)
Cadherin_repeat 379..481 CDD:206637 28/109 (26%)
Cadherin_repeat 489..586 CDD:206637 29/101 (29%)
Cadherin_repeat 594..703 CDD:206637 27/153 (18%)
Cadherin_repeat 724..801 CDD:206637 20/100 (20%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
Cdh26NP_941058.1 Cadherin_repeat <58..136 CDD:206637 20/85 (24%)
Cadherin_repeat 144..246 CDD:206637 28/105 (27%)
Cadherin_repeat 255..367 CDD:206637 28/118 (24%)
Cadherin_repeat 393..474 CDD:206637 26/83 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24027
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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