DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and ft

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster


Alignment Length:2058 Identity:457/2058 - (22%)
Similarity:744/2058 - (36%) Gaps:590/2058 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDHNE-STN-IRYQITGGNIGNAFAV 84
            |.|.|.|.:::||.|::..|...:.::|.....::.|:|.|..: .|| :.|.:...|:.:.|:|
  Fly  3110 VNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSV 3174

  Fly    85 QNTTGVIYVASPLDYETRPRYELRLEATRN---RKNNYTTVVINVRDVNDNPPVFDRQTYRTQIT 146
            ....|.|.:..|:......||||.:.||..   .:::.|.|||.|...|.:.|.|...:|:..:.
  Fly  3175 GRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVP 3239

  Fly   147 EEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQ 211
            |.:.  :...||.|.|||.|......:.|.::|.....|      |.::..||.|.:.:.||.|.
  Fly  3240 ENEP--VGSTILTVGATDDDTGPNGMLRYSISGGNERQD------FSVDERTGGIVIQQQLDYDL 3296

  Fly   212 PNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSA 276
            ..   ::...:..||.|...|...|.:.:.|.|:|||.|.|....|...:.||...|:.|....|
  Fly  3297 IQ---EYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHA 3358

  Fly   277 VDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD- 340
            .|.|.|.   ||.:.|:.    :........|.:....|.|.:|| ..|.|....|::|:.|.: 
  Fly  3359 ADKDSPK---NAIIHYAF----LPSGPDRHFFIMNQSNGTISSAV-SFDYEERRIYTLQIKAKNP 3415

  Fly   341 GGGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETN--GTYIPETPILTVTVQDEDETNTFQYK 403
            ...::......:.|..:|:..|||.:..:..:|.||:  ||.:   ..:..|.:|..|.....|.
  Fly  3416 DSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRV---GAVQATDKDSGEDGRVYYL 3477

  Fly   404 VVPNS---GFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYH 465
            :|.:|   ||..|        ..||.:.:.:.||.|     :..|..:.|..|......|:|   
  Fly  3478 LVGSSNDKGFRID--------TNTGLIYVARHLDRE-----TQNRVVLTVMAKNYGSIRGND--- 3526

  Fly   466 VAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDAD-QGGHSKVAYKIVRSTN 529
            ...:.|::.::|.|| .|:|.:.:...:|.|...|||.:...||.|.| :..:::.:|.|:.. |
  Fly  3527 TDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIING-N 3589

  Fly   530 RKRQFAIS-DRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFA-Q 592
            .|:.|.|. ..|.:|....||||....:::.|.|||.|.|.:|.:||:.:.::|||||.|||. :
  Fly  3590 LKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPE 3654

  Fly   593 DYKPTLPEN-VSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGV 656
            .....:.|| .:|..|:.:.|.|||  |..||||||::   |...:.|:...|      |..:||
  Fly  3655 GLNGYISENEPAGTSIMTLIASDPD--LPRNGGPFTYQ---LIGGKHKSWLSV------DRNSGV 3708

  Fly   657 AIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVLVYNYQGQS 721
              :.|...||||........||::|:|.|.......||:|:.|.|||.....|..:.|..:.|  
  Fly  3709 --VRSTTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDNPSTTRSLHIAVSLFNG-- 3769

  Fly   722 QDTPIGRVYVND--PDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKV---- 780
             |.| ..|.:.|  |:|.|:                    .|....|......:.||:..:    
  Fly  3770 -DLP-SNVKLADVRPNDIDI--------------------VGDYRCRLQKNPAQSQLQLAIPRAC 3812

  Fly   781 -------------------YDREHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRT- 825
                               .|.:||  |:.:.:||..:....|.:..:.|:.:.::|...|:.. 
  Fly  3813 DLITTSHTTPIASVFSYTGNDGKHG--DVSSKVSVAFQSFNNETLANSVSIMVRNMTAYHFLANH 3875

  Fly   826 WNPVKNQVEPSKLERFRNKLAELLYTDRDNVDVFSVQLKEGSPYPLTDVHF-----AARSATQQP 885
            :.|:        ||..::::     ::.|.|.::|  |.||.....|::..     .|:::.|||
  Fly  3876 YRPI--------LEMIKSRM-----SNEDEVILYS--LLEGGSGNSTNLQLLMAVRLAKTSYQQP 3925

  Fly   886 YFKAVRLNGVVQMHREEIEKDVGLNITMVNINEC------------------------------- 919
            .:...||........|.::|:|     :|....|                               
  Fly  3926 KYLIERLREKRSAFSELLQKEV-----IVGYEPCSEPDVCENGGVCSATMRLLDAHSFVIQDSPA 3985

  Fly   920 --------LHEGKGKCGS----------------NSCTSKVE---LG-----------------K 940
                    :|:...:|.|                |.|.|:|:   ||                 |
  Fly  3986 LVLSGPRVVHDYSCQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEK 4050

  Fly   941 KPYTVSVNRTALVGVRLDISAQ-----CVCRARNFTHQ----DHNCRTHLCYNGGRCVETRNGPK 996
            :...|..::....|.....|..     |:||.....:|    ..:||.:.|.:||.||..:.|.|
  Fly  4051 ERSDVCYSKPCRNGGSCQRSPDGSSYFCLCRPGFRGNQCESVSDSCRPNPCLHGGLCVSLKPGYK 4115

  Fly   997 CVACPVGYNGPRCQQSTRSFRGNGWAWYPPLQLCQESHLSLEFITRVADGLILYNGPIVPPKPEE 1061
            | .|..|..|..|::.:..|:...:..:|.|.: ..:.:|:.|.|...:.|:|||..:     :.
  Fly  4116 C-NCTPGRYGRHCERFSYGFQPLSYMTFPALDV-TTNDISIVFATTKPNSLLLYNYGM-----QS 4173

  Fly  1062 TVISDFIALELEQG--YPRLLIDFGSGTLELRVKT---KKTLDDGVWHRLDIFWDTENVRMVV-- 1119
            ...|||:|:||..|  |      |.||.....:.|   .:.|.||.||::..   |.|.|::.  
  Fly  4174 GGRSDFLAIELVHGRAY------FSSGGARTAISTVIAGRNLADGGWHKVTA---TRNGRVMSLS 4229

  Fly  1120 --------DFCRTALVSEMEDGTPPEFDDNACQARGQIPPFAESLNLN-QPLQLGGLY------- 1168
                    |.|...|..           |::|.| .::.|.. :||.| |||.:|||.       
  Fly  4230 VAKCADSGDVCTECLPG-----------DSSCYA-DEVGPVG-TLNFNKQPLMIGGLSSADPILE 4281

  Fly  1169 ---RQHFDQTLYNWQYAFSSKGFDGCIRNVIHNSEHYDLAFPALARNSFPACPQTDEVCLKTEHT 1230
               :.|.|..:             ||:.:|.......:|:.|...:.....|.:  :.|......
  Fly  4282 RPGQVHSDDLV-------------GCLHSVHIGGRALNLSLPLQQKGILAGCNR--QACQPALAA 4331

  Fly  1231 ARCWEH-GNCVASLVQAKCHCQPGWMGPGCNVPTIPTTFKAQSYVKFALS--------------- 1279
            .||... |.|:.....:.|.|......|.|:....|.|....::|:|.:|               
  Fly  4332 ERCGGFAGQCIDRWSSSLCQCGGHLQSPDCSDSLEPITLGEGAFVEFRISEIYRRMQLLDNLYNS 4396

  Fly  1280 -------------FEPDRFST---------QLQLRFRT-REQGGELFRVSDQHHREYAILELRRG 1321
                         .....|||         .|.:.||| ::||..|:..::|   .:..|.||.|
  Fly  4397 KSAWLDNQQMRERRAVSNFSTASQIYEAPKMLSMLFRTYKDQGQILYAATNQ---MFTSLSLREG 4458

  Fly  1322 HLQF--RYNLNSMRNEEQLLTLTAIAVNDGQWHVIRISRYGSAALMELDGGESRRYNESFHFTG- 1383
            .|.:  :.:|......::..||     |||:||.:.:.....:..:.:||   |:..:.....| 
  Fly  4459 RLVYYSKQHLTINMTVQETSTL-----NDGKWHNVSLFSESRSLRLIVDG---RQVGDELDIAGV 4515

  Fly  1384 HQ----WLTIDKQEGVYAGGKAEYTGIKTFEVQSDFQRSCLDDIRLDGKHLPLPPAMNGTQWGQA 1444
            |.    :|||     :..||:| :.|             ||.::.::.:..||    ||      
  Fly  4516 HDFLDPYLTI-----LNVGGEA-FVG-------------CLANVTVNNELQPL----NG------ 4551

  Fly  1445 TMARNLERNCPSNRPCSNVICPDPFDCVDLWNEYECTCSEGRIMSSDTKGCVDRNECLDLPCLNG 1509
                            |..|.|:.        .|     .|:|.|    ||              
  Fly  4552 ----------------SGSIFPEV--------RY-----HGKIES----GC-------------- 4569

  Fly  1510 ATCINLEPRLRYRCICPEGYWGENCELVQEGQRLKLSMGALGAIFVCLIIILILALI--FVLYSR 1572
                             .|..|::...|.:    .||:|.  .:.:...:||::|::  :|:|..
  Fly  4570 -----------------RGDIGQDAAQVAD----PLSIGF--TLVIVFFVILVVAILGSYVIYRF 4611

  Fly  1573 KRKTT------------KKKKRSGPEKDVRETVISYEDEGGGEDDMTAFDITPLQIPISAQG--- 1622
            :.|..            |.|...||   |.::.:         |.:...::.|.:.|....|   
  Fly  4612 RGKQEKIGSLSCGVPGFKIKHPGGP---VTQSQV---------DHVLVRNLHPSEAPSPPVGAGD 4664

  Fly  1623 ------------GP--------------------------PDIAACKMPII-----YPVMTLLPP 1644
                        ||                          |||...:.|:|     .|:..|.| 
  Fly  4665 HMRPPVGSHHLVGPELLTKKFKEPTAEMPQPQQQQQRPQRPDIIERESPLIREDHHLPIPPLHP- 4728

  Fly  1645 GQELNVAYLMEERKQRIDKDNNAPPFDDLRNFTFEGSGSIAESLSSLASGTDDENQDFNY----- 1704
                    |..|....:|..:..|...||.|     :.|||.|         |.:..::|     
  Fly  4729 --------LPLEHASSVDMGSEYPEHYDLEN-----ASSIAPS---------DIDIVYHYKGYRE 4771

  Fly  1705 ---LQNWGPRFNALAAMYVHDKAKAS------------SQLPSDGGGGSGDGPGPGAS---SSSP 1751
               |:.:......::| |.|.|.:.|            :...:...||....|...||   .|:|
  Fly  4772 AAGLRKYKASVPPVSA-YTHHKHQNSGSQQQQQQHRHTAPFVTRNQGGQPPPPPTSASRTHQSTP 4835

  Fly  1752 LGGGGTG----------------GGSGIPGNVLAVVATGSGAG 1778
            |......                .|..:...:||..::..|.|
  Fly  4836 LARLSPSSELSSQQPRILTLHDISGKPLQSALLATTSSSGGVG 4878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637 26/95 (27%)
Cadherin_repeat 140..248 CDD:206637 27/107 (25%)
Cadherin_repeat 256..359 CDD:206637 23/103 (22%)
Cadherin_repeat 379..481 CDD:206637 23/104 (22%)
Cadherin_repeat 489..586 CDD:206637 33/98 (34%)
Cadherin_repeat 594..703 CDD:206637 36/109 (33%)
Cadherin_repeat 724..801 CDD:206637 16/101 (16%)
EGF_CA 977..1010 CDD:238011 13/32 (41%)
LamG 1013..1198 CDD:238058 51/210 (24%)
EGF_2 <1233..1259 CDD:285248 6/26 (23%)
Laminin_G_2 1293..1428 CDD:280389 34/142 (24%)
EGF_CA 1497..1535 CDD:238011 2/37 (5%)
Cadherin_C 1583..1719 CDD:279398 32/189 (17%)
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:278457
Cadherin 950..1026 CDD:278457
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637
Cadherin 3018..3114 CDD:278457 2/3 (67%)
Cadherin 3129..3220 CDD:278457 24/90 (27%)
Cadherin_repeat 3233..3330 CDD:206637 27/107 (25%)
Cadherin_repeat 3338..3434 CDD:206637 23/103 (22%)
Cadherin_repeat 3443..3541 CDD:206637 26/116 (22%)
Cadherin_repeat 3550..3647 CDD:206637 33/97 (34%)
Cadherin_repeat 3657..3753 CDD:206637 36/108 (33%)
EGF 4017..4047 CDD:278437 6/29 (21%)
EGF_CA 4056..4090 CDD:238011 6/33 (18%)
EGF_CA 4094..4128 CDD:238011 13/34 (38%)
Laminin_G_1 4156..4306 CDD:278483 47/189 (25%)
LamG 4428..4543 CDD:238058 35/144 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100175
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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