Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038953616.1 | Gene: | Cdh5 / 307618 | RGDID: | 1307370 | Length: | 777 | Species: | Rattus norvegicus |
Alignment Length: | 831 | Identity: | 212/831 - (25%) |
---|---|---|---|
Similarity: | 341/831 - (41%) | Gaps: | 202/831 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 134 PVFDRQT-----YRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFD 193
Fly 194 INRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQD-EGGEGLVGYADIQVNLKDINDNAPQFPQGIY 257
Fly 258 FGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVC 322
Fly 323 CLDRERTPDYSIQVVAMDGGGLK---GTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPE- 383
Fly 384 ----TPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGD-GTGSLKIIQPLDYEDPLQSSG 443
Fly 444 FRFRIQVNDKGD-----DGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTK---V 500
Fly 501 GTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILA--I 563
Fly 564 DD-GSP-ARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVS-GKKILEVAAKDPDDRLRGNGGP 625
Fly 626 FTFRLDPLASDEIKAGFKVE---YDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAM 687
Fly 688 TGTSTLTVTIGDVNDN---------KMQPG----------------------------------- 708
Fly 709 --SKSVLVYNYQGQSQDTPIGRVYVNDPDDWDVP-----------------DKK--YYWEVQEHQ 752
Fly 753 RFKLDTDTGILTMRAGTRRGRYQLRFK-----------VYDREH-----GQEDIPANLSVTVRDI 801
Fly 802 TAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELLYTD 852 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 25/113 (22%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 37/105 (35%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 26/112 (23%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 26/103 (25%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 33/112 (29%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 18/111 (16%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
Cdh5 | XP_038953616.1 | CA | 69..139 | CDD:214520 | 20/78 (26%) |
Cadherin_repeat | 145..244 | CDD:206637 | 38/106 (36%) | ||
Cadherin_repeat | 252..359 | CDD:206637 | 27/123 (22%) | ||
Cadherin_repeat | 368..466 | CDD:206637 | 26/102 (25%) | ||
Cadherin_repeat | 473..568 | CDD:206637 | 32/108 (30%) | ||
Cadherin_C | 619..770 | CDD:395833 | 37/183 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I9369 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |