DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and CDH20

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_114097.2 Gene:CDH20 / 28316 HGNCID:1760 Length:801 Species:Homo sapiens


Alignment Length:898 Identity:231/898 - (25%)
Similarity:371/898 - (41%) Gaps:233/898 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 TGGNIGNAFAVQNTTGV---IYVASPLDYET-----RPRYELRLEATRNRKNNYTTVVINVRDVN 130
            |.|.:.||   :|..|:   :|....:|..|     .|..:..|||.                ::
Human     3 TSGRMSNA---KNWLGLGMSLYFWGLMDLTTTVLSDTPTPQGELEAL----------------LS 48

  Fly   131 DNPPVFDRQTYRTQ------ITEEDDRNLPKRILQVTATDGDVDR-PINIVYFLTGQGIDPDNPA 188
            |.|....| |.|:.      :.||.....|   |.|.....|:|| ..:|.|.|:|:|      |
Human    49 DKPQSHQR-TKRSWVWNQFFVLEEYTGTDP---LYVGKLHSDMDRGDGSIKYILSGEG------A 103

  Fly   189 NSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQD-EGGEGLVGYADIQVNLKDINDNAPQF 252
            ...|.|:.|||||..::.|||::   |.|:.....|.| ..|..:...::..:.::|||||.|:|
Human   104 GIVFTIDDTTGDIHAIQRLDREE---RAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKF 165

  Fly   253 PQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLI 317
            ..|.|...|.|....|:||:.::|.|.|||....:|:::|||.:       |.|.|.::.:||:|
Human   166 LDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQ-------GQPYFSVDSKTGVI 223

  Fly   318 KTAVCCLDRERTPDYSIQVVAMDG----GGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNG 378
            :||:..:|||....|.:.:.|.|.    |||.||.|.:|.:.|:||.||:|.:..:...|.|:  
Human   224 RTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLES-- 286

  Fly   379 TYIPETPILT----VTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGD-GTGSLKIIQPLDYEDP 438
                 .||.:    |..:|.||....:.|.....|.|||.|.:..:.: ..|.:.:.:||.:|  
Human   287 -----APISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTDPNFQVGIITVKKPLSFE-- 344

  Fly   439 LQSSGFRFRIQVNDKGDDGPGGSDKYHVAY---------SWVVVKLRDINDNVPKFDREHIEVSI 494
             ....:..:::         |.:....:.:         :.|.:.:.|: |..|.|:.....|.:
Human   345 -SKKSYTLKVE---------GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPGFYFVEV 398

  Fly   495 YEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAIS-DRGAVSIQRPLDRETQDRHHI 558
            .||..:||.::...|.|.|...:| :.|.|.||::..|.|.:. ..||:...||||||....|:|
Human   399 PEDVAIGTTIQIISAKDPDVTNNS-IRYSIDRSSDPGRFFYVDITTGALMTARPLDREEFSWHNI 462

  Fly   559 QILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENV-SGKKILEVAAKDPDDRLRGN 622
            .:||::..:|::..:..:|:.|.|||||||.|.:.|:..:.||. :|:.|..|:|.|.||  ..|
Human   463 TVLAMEMNNPSQVGSVPVTIKVLDVNDNAPEFPRFYEAFVCENAKAGQLIQTVSAVDQDD--PRN 525

  Fly   623 GGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAM 687
            |..|.:.|.|.|::  ...|.:    |.:.:|...|::....|.::.|..:.:||.|.|:|.|.:
Human   526 GQHFYYSLAPEAAN--NPNFTI----RDNQDNTARILTRRSGFRQQEQSVFHLPILIADSGQPVL 584

  Fly   688 TGTSTLTVTIGDVNDN----------KMQPGSKS-----------------VLVYNYQGQSQDTP 725
            :.|.|||:.:...:|:          .|.|.|.|                 ||:.....:.:..|
Human   585 SSTGTLTIQVCSCDDDGHVMSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQP 649

  Fly   726 IGRVYVND------------------PDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAG---- 768
                |:.|                  .:|.:..|....|..:|.|              ||    
Human   650 ----YIIDDEENIHENIVRYDDEGGGEEDTEAFDIAAMWNPREAQ--------------AGAAPK 696

  Fly   769 TRR---------GRY-------------QLRFKVYDRE----------------HGQEDIPANLS 795
            ||:         .||             .:..|:|:.:                .|...:..:||
Human   697 TRQDMLPEIESLSRYVPQTCAVNSTVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLS 761

  Fly   796 VTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAEL 848
             :::..|:::.|..           ||:..|.|           ||| |||||
Human   762 -SLQSATSDSEQSF-----------DFLTDWGP-----------RFR-KLAEL 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 13/65 (20%)
Cadherin_repeat 140..248 CDD:206637 34/115 (30%)
Cadherin_repeat 256..359 CDD:206637 37/106 (35%)
CA 388..483 CDD:214520 18/108 (17%)
Cadherin_repeat 489..586 CDD:206637 33/97 (34%)
Cadherin_repeat 594..703 CDD:206637 32/109 (29%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
CDH20NP_114097.2 CA 85..163 CDD:214520 29/86 (34%)
Cadherin_repeat 169..270 CDD:206637 38/107 (36%)
Cadherin_repeat 278..385 CDD:206637 21/126 (17%)
Cadherin_repeat 394..490 CDD:206637 33/96 (34%)
Cadherin_repeat 498..595 CDD:206637 32/104 (31%)
CADH_Y-type_LIR 733..792 CDD:460041 17/82 (21%)
Blue background indicates that the domain is not in the aligned region.

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