DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and Dchs1

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_006507718.1 Gene:Dchs1 / 233651 MGIID:2685011 Length:3431 Species:Mus musculus


Alignment Length:827 Identity:227/827 - (27%)
Similarity:375/827 - (45%) Gaps:112/827 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IADKNDSPPYFDRFLYETE-IDENADLQSTVLTVNAKDHNESTN--IRYQITGGNIGNAFAVQNT 87
            :.|.||:.|.|||.||..| :.|.|...|.|:.|.|:|.::.||  |.|.:..|...:.|::..|
Mouse   596 VTDVNDNAPAFDRQLYRPEPLPEVALPGSFVVRVTARDPDQGTNGQITYSLAPGTHTHWFSIDPT 660

  Fly    88 TGVIYVASPLDYETRPRYELRLEATRNRKN---NYTTVVINVRDVNDNPPVFDRQTYRTQITEED 149
            :|:|..|:.||||..|:.:|.:.||.....   :..||.:.::|||||.|.|.|..|...:.|..
Mouse   661 SGIITTAATLDYELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGT 725

  Fly   150 DRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNG 214
            ...  ...|||||||.| ..|..::.:..|.|:...  .:..|.|:..:||:...:.|||||  |
Mouse   726 QPG--TCFLQVTATDAD-SGPFGLLSYSLGAGLGAS--GSPPFRIDAHSGDVCTTRTLDRDQ--G 783

  Fly   215 RPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDY 279
            ...:.|||.|.|  |.||.....::|.:.|.|||.|||....|..:::...|.|::|:.:.|   
Mouse   784 PSSFDFTVTAID--GGGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHA--- 843

  Fly   280 DDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGL 344
            .||::..:.:|.|.|...     ...|:|.::..:||: |....|.|.......:::.|.|||||
Mouse   844 HDPDQGPHGRLSYHILAG-----NSPPLFALDAHSGLL-TVAWPLGRRANSVVQLEIGAQDGGGL 902

  Fly   345 KGTGTASIRVKDL--NDMPPQFTKDEWVTEVDETNGTYIPETPI--------------LTVTVQD 393
            :....|.:.:..:  ...||.|.:.::|..|.|   ...|.|.:              :|:|:..
Mouse   903 QAEPIARVNISIVPGTPTPPIFEQLQYVFSVPE---DVAPGTSVGIIQAHNPPGRLGPVTLTLSG 964

  Fly   394 EDETNTFQYKVVPNSGFGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGP 458
            .|          |...|..|        ..:|.||.::|||.|  |........::.      |.
Mouse   965 GD----------PRGLFSLD--------SPSGLLKTLRPLDRE--LLGPVLELEVRA------GS 1003

  Fly   459 GGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYK 523
            |....:.||.  :.|.|.|:|||.|.|......|.:.::|..||.:...:|.|.|.|.:|::.:.
Mouse  1004 GTPPVFAVAR--IRVLLDDVNDNSPAFPAPEDTVLLPQNTAPGTPIYTLRALDPDSGANSRITFN 1066

  Fly   524 IVRSTNRKRQFAIS-DRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKD--VND 585
            ::...:  ..|.:. ..|.|.:..||.......|.:::.|.|.|||.||:...|.|:::|  ::.
Mouse  1067 LLAGGD--GLFTVDPTTGHVRLMGPLGPPGGPAHELEVEARDGGSPPRTSHFRLRVVIQDLGIHG 1129

  Fly   586 NAPTF-AQDYKPTLPE-NVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDR 648
            .||.| :..|:..||. ..:|.:||:|.|:.||      |.|.|:.   ||:|...:.|.:|   
Mouse  1130 LAPRFDSPTYRVDLPSGTTTGTQILQVQAQAPD------GSPVTYH---LAADGASSPFGLE--- 1182

  Fly   649 RGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPA----MTGTSTLTVTIGDVNDNKMQPGS 709
               :::|...:.:  ..|||:|:.|.:.: :..:|:.|    .|||:|:.|.|.:.||:..:...
Mouse  1183 ---SQSGWLWVRT--ALDRESQELYTLKV-MAVSGSKAELGQQTGTATVRVIILNQNDHSPRLSE 1241

  Fly   710 KSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQ----EHQRFKLDTDTG-ILTMRAGT 769
            :...:...:.|...|.:|||:..|.|..  |:.:..:.:|    :.:.|::...|| :.|::...
Mouse  1242 EPTFLAVAENQPPGTSVGRVFATDRDSG--PNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLD 1304

  Fly   770 R--RGRYQLRFKVYDREHGQEDIPANLSVTVRDITAEA---VQQAGS 811
            |  :..:||..:|.|...........:.|.|.|:...:   :|.:|:
Mouse  1305 REQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQASGA 1351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 32/96 (33%)
Cadherin_repeat 140..248 CDD:206637 34/107 (32%)
Cadherin_repeat 256..359 CDD:206637 24/104 (23%)
CA 388..483 CDD:214520 24/94 (26%)
Cadherin_repeat 489..586 CDD:206637 25/99 (25%)
Cadherin_repeat 594..703 CDD:206637 33/113 (29%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
Dchs1XP_006507718.1 Cadherin_repeat 183..273 CDD:206637
Cadherin_repeat 284..385 CDD:206637
Cadherin_repeat 394..492 CDD:206637
Cadherin_repeat 508..602 CDD:206637 2/5 (40%)
Cadherin_repeat 616..708 CDD:206637 30/91 (33%)
Cadherin_repeat 717..815 CDD:206637 34/106 (32%)
Cadherin_repeat 823..915 CDD:206637 24/100 (24%)
Cadherin_repeat 928..1024 CDD:206637 27/126 (21%)
Cadherin_repeat 1034..1124 CDD:206637 24/91 (26%)
Cadherin_repeat 1138..1235 CDD:206637 33/114 (29%)
Cadherin_repeat 1248..1341 CDD:206637 21/94 (22%)
Cadherin_repeat 1358..1446 CDD:206637
Cadherin_repeat 1469..1565 CDD:206637
Cadherin_repeat 1578..1675 CDD:206637
Cadherin_repeat 1684..1777 CDD:206637
Cadherin_repeat 1786..1880 CDD:206637
Cadherin_repeat 1890..1984 CDD:206637
Cadherin_repeat 1992..2089 CDD:206637
Cadherin_repeat 2116..2192 CDD:206637
Cadherin_repeat 2207..2300 CDD:206637
Cadherin_repeat 2308..2406 CDD:206637
Cadherin_repeat 2415..2505 CDD:206637
Cadherin_repeat 2514..2611 CDD:206637
Cadherin_repeat 2619..2731 CDD:206637
Cadherin_repeat 2739..2835 CDD:206637
Cadherin_repeat 2845..2941 CDD:206637
Cadherin_repeat 2950..3056 CDD:206637
Blue background indicates that the domain is not in the aligned region.

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