DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CadN2 and Fat3

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_038936706.1 Gene:Fat3 / 191571 RGDID:620657 Length:4610 Species:Rattus norvegicus


Alignment Length:1979 Identity:431/1979 - (21%)
Similarity:711/1979 - (35%) Gaps:595/1979 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDHNESTN--IRYQITGGN----IGN 80
            |.:.:.|.||:.|.|:...|||.|.|...:.:.:..|.|.|.:...|  :.|.:...:    :..
  Rat  2822 VDVKVLDLNDNKPVFETSSYETIIMEGMPVGTKLAQVRAIDTDWGANGQVTYSLHSDSHLEKVME 2886

  Fly    81 AFAVQNTTGVIYVASPLDYETRPRYELRLEATRNRK----NNYTTVVINVRDVNDNPPVFDRQTY 141
            ||.:.:.||.|.....||:||.|.:...:.|:...:    ::...|.:.|.|:|||.|||..:.|
  Rat  2887 AFNIDSNTGWISTLKDLDHETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVY 2951

  Fly   142 RTQITEEDDRNLPKRILQVTAT-DGDVDRPIN--IVYFLTGQGIDPDNPANSKFDINRTTGD--I 201
            |..:.|.|.   |..::.|.:| |.|... ||  :.|.:||     .|| ..:|.:.....:  :
  Rat  2952 RGNVKESDP---PGEVVAVLSTLDKDTSN-INRQVSYHITG-----GNP-RGRFALGMVQSEWKV 3006

  Fly   202 FVLKPLDRDQPNGRPQWRFTVFAQDEGGEGL-VGYADIQVNLKDINDNAPQFPQGIYFGNVTENG 265
            :|.:||||::.:       ..|......:|| |..|.::|.:.|:|||:|...|..|..::.|:.
  Rat  3007 YVKRPLDREEQD-------IYFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDI 3064

  Fly   266 TAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTP 330
            .:...::.:||.|.|   ..:|..:.||:      ..:|...|.::||:|.:|| :..|||||.|
  Rat  3065 PSNKIILKVSAKDAD---IGSNGDIRYSL------YGSGNSDFFLDPESGELKT-LALLDRERVP 3119

  Fly   331 DYSIQVVAMDGGGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED 395
            .|::...|.||||...:.|..:.::|:||.||.|:.:.:...|.|...     |..|...||..|
  Rat  3120 VYNLIARATDGGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTA-----TKALLTRVQAVD 3179

  Fly   396 ETNTFQYKVVPN-----SG-FGADKFAMVRNGDGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKG 454
            .......|||.:     || |..|        ..:|.:.:.||||.|   |.|.:...::..|: 
  Rat  3180 PDVGINRKVVYSLEDSASGVFSID--------SSSGVIVLEQPLDRE---QQSSYNISVRATDQ- 3232

  Fly   455 DDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSK 519
              .||.|..   :.:.|.:.:.|||||.|.|:|....|::.|||.:||.:....||..|.|.:::
  Rat  3233 --SPGQSLS---SLTSVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAE 3292

  Fly   520 VAYKIVRSTNRKRQFAISDR-GAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDV 583
            :.| ::||.|.:.:|.|:.: |.:|:...||.|...|.::.:.|.|.|:||.:..||:::.:.||
  Rat  3293 ITY-LIRSGNEQGKFRINPKTGGISVLEALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDV 3356

  Fly   584 NDNAPTFAQD-YKPTLPEN-VSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEY 646
            |||.|.|:|| |...:.|: :.|..::.:.|:|.|.:..|.     .|...:..|.         
  Rat  3357 NDNPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKPNGQ-----IRFSIVGGDR--------- 3407

  Fly   647 DRRGDNENGV----AIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNK--M 705
                |||..|    .::...:..|||....|::.|:..|:|.|||:.|:|:.:.|.|||||.  .
  Rat  3408 ----DNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVF 3468

  Fly   706 QPGS-----------------------------------------------------KSVLVYNY 717
            .|.:                                                     :|.:|:.:
  Rat  3469 TPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHGILRSAVVFRH 3533

  Fly   718 --------------QGQSQ---------------------------------DTP---IGRVYVN 732
                          .|:.|                                 |.|   ||:::..
  Rat  3534 MESPEYLLCIQAKDSGKPQQVSHTYIRVRVIEESTHKPTAIPLEIFIVTMEDDFPGGVIGKIHAT 3598

  Fly   733 DPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDREHGQEDIPANLSVT 797
            |.|.:||  ..:..:.::...||:::..|.:....|...|:|.|...|.|   |:..:|.::.|.
  Rat  3599 DQDMYDV--LTFALKSEQKSLFKVNSHDGKIIALGGLDSGKYVLNVSVSD---GRFQVPIDVVVH 3658

  Fly   798 VRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELLYTDR-DNVDVFSV 861
            |..:..|.:|...::|..:::.||||..           .:..||..|...:.|.: |::.:.|:
  Rat  3659 VEQLVHEMLQNTVTIRFENVSPEDFVGL-----------HMHGFRRILRNAVLTQKQDSLRIISI 3712

  Fly   862 QLKEGSPYPLTDVHFAARSATQQPYFKAVRLNGV--VQMHREEIEKDVGLNITMVNINECLHEGK 924
            |...|:..  .|:.||....:.:.|..|..:..:  .:.|.|.:     ::|..:....|    .
  Rat  3713 QPVVGTNQ--LDMLFAVEMHSSEFYKPAYLIQKLSNARRHLENV-----MHIAAILEKNC----S 3766

  Fly   925 G-KCGSNSCTSKVELGKKP-YTVSVNRTALVGVRLDISAQCVCRARNFTHQDHNCRTHLCYNGGR 987
            | .|....|...:.|.... .|.|..|.:.|..|...:.:|.|........:..|....|....:
  Rat  3767 GLDCQEQHCEQGLSLDSHALMTYSTARISFVCPRFYRNVRCTCNGGVCPGSNDPCVEKPCPEDMQ 3831

  Fly   988 CV--ETRNGPKCVACPVGYNGPRCQQSTRSFRGNGWAWYPPLQLCQESH-----LSLEFITRVAD 1045
            ||  |....|....||.|..|.....::.||.||.:..|   :|.:.|.     |:|...|..::
  Rat  3832 CVGYEASRRPFLCQCPPGKLGECSGHTSLSFAGNSYIKY---RLSENSREEDFKLALRLRTLQSN 3893

  Fly  1046 GLILYNGPIVPPKPEETVISDFIALELEQGYPRLLIDFGSGTLELRVKTKKTLDDGVWHRLDIFW 1110
            |:|:|           |..:..:.|::.:|.....:|.|||...|.: :.:.::||.||  .:|.
  Rat  3894 GIIMY-----------TRANPCMILKIVEGKLWFQLDCGSGPGILGI-SSRAVNDGSWH--SVFL 3944

  Fly  1111 DTENVRMVVDFCRTALVSEMEDGTPPEFDDNACQARGQIPPFAESLNLNQPLQLGGLYRQHFDQT 1175
            :...     :|...:|            ||:..:.| :.|.:.::|:.:..:..|.|.:....::
  Rat  3945 ELNR-----NFTSLSL------------DDSYVERR-RAPLYFQTLSTDSAIFFGALVQADNIRS 3991

  Fly  1176 LYNWQYAFSSKGFDGCIRNVIHNSEHYDLAFPALARNSFPACPQTDEVCLKTEHTARCWEHGNCV 1240
            |.:.:......||.||:.:|:.|  |.:|.... .|:||.      ||...||....|       
  Rat  3992 LTDTRVTQVLGGFQGCLDSVVLN--HNELPLQN-KRSSFA------EVVGLTELKLGC------- 4040

  Fly  1241 ASLVQAKCHCQPGWMGPGCNVPTIPTTFKAQSYVKFALSFEPDRFSTQLQLRFRTREQGGELFRV 1305
             .|....|...|...|..|:                                             
  Rat  4041 -VLYPDACQRSPCLHGGSCS--------------------------------------------- 4059

  Fly  1306 SDQHHREYAILELRRGHLQFRYNLNSMRNEEQLLTLTAIAVNDGQWHVIRISRYGSAALMELDGG 1370
                                                                             
  Rat  4060 ----------------------------------------------------------------- 4059

  Fly  1371 ESRRYNESFHFTGHQWLTIDKQEGVYAGGKAEYTGIKTFEVQSDFQRSCLDDIRLDGKHLPLPPA 1435
                                   |:.:||               :|.|||..             
  Rat  4060 -----------------------GLPSGG---------------YQCSCLSQ------------- 4073

  Fly  1436 MNGTQWGQATMARNLERNCPSN------RPCSNVICPDPFDCVDLWNEYECTCSEG--RIMSSDT 1492
            ..||             ||.|.      .||.|....||     :.|.:.|:|..|  .:...| 
  Rat  4074 FTGT-------------NCESEITACFPNPCRNGGSCDP-----IGNTFICSCKAGLTGVTCED- 4119

  Fly  1493 KGCVDRNECLDLPCLNGATCINLEPRLRYRCICPEGYWGENCEL-------VQEGQRLKLSMGAL 1550
                |.:||....|.||.:|:||..  .:.|.|..||.|:.|.|       :|.|... :....|
  Rat  4120 ----DVDECEREECENGGSCVNLFG--SFFCNCTPGYVGQYCGLRPVVVPNIQAGHSY-VGKEEL 4177

  Fly  1551 GAIFVCLIIILILALIFVLYSRKRKTTKKKKRSGPE--KDVRETVISYEDEG-------GGEDDM 1606
            ..|.|.|.:|..|.::|::: ||:...|...|:...  :|.....:.::..|       .|:...
  Rat  4178 IGIAVVLFVIFTLIVLFIVF-RKKVFRKNYSRNNITLVQDPATAALLHKSNGIPFRSLRAGDGRN 4241

  Fly  1607 TAFDITPLQIPI---------------------SAQGGPPD------------IAACKMPIIYPV 1638
            ...::.|.|:|:                     .|.||.|.            :.|.:..::..|
  Rat  4242 VYQEVGPPQVPVRPMAYTPCFQSDSRSNLDKGLDALGGEPQELSTFHPESPRILTARRGVVVCSV 4306

  Fly  1639 MTLLPPGQELNVAYLMEE----RKQRIDKDNNAPPFDDLRNFTF-----EGSGSIAESLSSLASG 1694
            ...||.     |:....:    ||...|..:.....:|....|.     :||.|..:||:|..|.
  Rat  4307 APNLPA-----VSPCRSDCDSIRKNGWDTGSENKGAEDTGEVTCFANSNKGSNSEVQSLNSFQSD 4366

  Fly  1695 TDDEN---------------------------QDFNYLQNW-------GPRFNALAAMYVHDKAK 1725
            :.|:|                           |::|...:|       |.|.:.:..|..::   
  Rat  4367 SGDDNASIVTVIQLVNNVVDSIENEVSVMDQGQNYNRAYHWDTSDWMPGARLSDIEEMPNYE--- 4428

  Fly  1726 ASSQLPSDGGGGSGDGPGPGASSSSPLGG 1754
                  |..||....|......|...|||
  Rat  4429 ------SQDGGAVHQGSTRELESDYYLGG 4451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637 25/100 (25%)
Cadherin_repeat 140..248 CDD:206637 30/113 (27%)
Cadherin_repeat 256..359 CDD:206637 30/102 (29%)
Cadherin_repeat 379..481 CDD:206637 28/107 (26%)
Cadherin_repeat 489..586 CDD:206637 32/97 (33%)
Cadherin_repeat 594..703 CDD:206637 29/113 (26%)
Cadherin_repeat 724..801 CDD:206637 20/79 (25%)
EGF_CA 977..1010 CDD:238011 10/34 (29%)
LamG 1013..1198 CDD:238058 41/189 (22%)
EGF_2 <1233..1259 CDD:285248 5/25 (20%)
Laminin_G_2 1293..1428 CDD:280389 7/134 (5%)
EGF_CA 1497..1535 CDD:238011 14/37 (38%)
Cadherin_C 1583..1719 CDD:279398 34/220 (15%)
Fat3XP_038936706.1 Cadherin_repeat 47..152 CDD:206637
Cadherin_repeat 161..261 CDD:206637
CA 285..363 CDD:214520
Cadherin_repeat 379..467 CDD:206637
Cadherin_repeat 476..573 CDD:206637
Cadherin_repeat 591..671 CDD:206637
Cadherin_repeat 732..826 CDD:206637
Cadherin_repeat 834..930 CDD:206637
Cadherin_repeat 939..1022 CDD:206637
Cadherin_repeat 1048..1143 CDD:206637
Cadherin_repeat 1151..1249 CDD:206637
Cadherin_repeat 1257..1347 CDD:206637
Cadherin_repeat 1366..1478 CDD:206637
Cadherin_repeat 1486..1584 CDD:206637
Cadherin_repeat 1593..1683 CDD:206637
Cadherin_repeat 1698..1787 CDD:206637
Cadherin_repeat 1795..1901 CDD:206637
Cadherin_repeat 1920..1999 CDD:206637
Cadherin_repeat 2009..2102 CDD:206637
Cadherin_repeat 2110..2201 CDD:206637
Cadherin_repeat 2213..2305 CDD:206637
Cadherin_repeat 2313..2412 CDD:206637
Cadherin_repeat 2420..2512 CDD:206637
Cadherin_repeat 2522..2618 CDD:206637
Cadherin_repeat 2626..2721 CDD:206637
Cadherin_repeat 2734..2832 CDD:206637 3/9 (33%)
Cadherin_repeat 2840..2942 CDD:206637 25/101 (25%)
Cadherin_repeat 2950..3047 CDD:206637 30/113 (27%)
Cadherin_repeat 3056..3149 CDD:206637 31/102 (30%)
Cadherin_repeat 3157..3254 CDD:206637 30/118 (25%)
Cadherin_repeat 3263..3359 CDD:206637 32/96 (33%)
Cadherin_repeat 3367..3464 CDD:206637 29/114 (25%)
Cadherin_repeat 3473..3564 CDD:206637 4/90 (4%)
Cadherin_repeat 3583..3660 CDD:206637 20/81 (25%)
Laminin_G_2 3887..4016 CDD:396680 33/162 (20%)
EGF_CA 4045..4080 CDD:238011 14/208 (7%)
EGF_CA 4079..4118 CDD:238011 11/43 (26%)
EGF_CA 4120..4155 CDD:238011 14/36 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100175
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.