Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001021650.1 | Gene: | hmr-1 / 173007 | WormBaseID: | WBGene00001980 | Length: | 2920 | Species: | Caenorhabditis elegans |
Alignment Length: | 1784 | Identity: | 541/1784 - (30%) |
---|---|---|---|
Similarity: | 822/1784 - (46%) | Gaps: | 298/1784 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 VRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDHNESTNIRYQITGGNIGN-AFAVQ 85
Fly 86 NTTGVIYVASPLDYETRPRYELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDD 150
Fly 151 RNLPKRILQVTATDGDVD-RPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNG 214
Fly 215 RPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTEN----GTAGSSVMTMS 275
Fly 276 AVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTP--DYSIQVVA 338
Fly 339 MDGG--GLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPI----LTVTVQDEDE- 396
Fly 397 --TNTFQYKVVPNSGFGADKFAMVRNGD----GTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGD 455
Fly 456 DGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHI----EVSIYEDTKVGTILEQFKATDADQGG 516
Fly 517 HSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVK 581
Fly 582 DVNDNAPTFAQDYKPTLP------ENVSGKKI--LEVAAKDPDDRLRGNGGPFTFRLDPLASDEI 638
Fly 639 KAGFKVEYDRRGDNENGVAIISSLRPFDREAQ---KSYAIPIEIKDNGAPAMTGTSTLTVTIGDV 700
Fly 701 NDNKMQPGSKSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTM 765
Fly 766 RAGTRRGRYQLRFKVYDREHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDE-------DFV 823
Fly 824 RTWNPVKNQVEPSKLERFRNKLAELLYTDRDNVDVFSVQL----KEGSPYPLTDVHFAARSATQQ 884
Fly 885 PYFKAVRLNGVVQMHREEIEKDVGLNITMVNINECLHEGKGKCGSNSCTSKVELGKKPY---TVS 946
Fly 947 VNRTALVGVRLDISAQCVC---RARNFTHQDHNCRTHLCYNGGRCVETRNGPKCVACPVGYNGPR 1008
Fly 1009 CQQSTRSFRGNGWAWYPPLQLCQESHLSLEFITRVADGLILYNGPIVPPKPEETV-ISDFIALEL 1072
Fly 1073 EQGYPRLLIDF-GSGTLELRVKTKKTLDDGVWHRLDIFWDTENVRMVVDFCRTALVSEMEDGTPP 1136
Fly 1137 EFDDNACQARGQIPPFAESLNLNQPLQLGG---LYRQHFDQTLYNWQYAFSSKGFDGCIRNVIHN 1198
Fly 1199 SEHYDLAFPALARNSFPACPQTDEVC--LKTEHTARCWEHGNCVASL-----VQAKCHCQPGWMG 1256
Fly 1257 PGCNVPTIPTTFKAQSYVKFA----------LSFEPDRFSTQLQLRFRTREQGG---ELFRVSDQ 1308
Fly 1309 HHREYAILELRRGH----LQFRYNLNS-MRNEEQLLTLTAIAVNDGQWHVIRISRYGSAALMELD 1368
Fly 1369 GGESRRYNESFHFTGHQWLTIDKQE-------GVYAGGKAEYTGIKTFEVQSDFQRSCLDDIRLD 1426
Fly 1427 GKHLPLP--PAMNGTQWGQATMAR--NLERNCPSNRPCSNV---ICPDPFDCVDLWNEYECTCSE 1484
Fly 1485 G--RIMSSDTK--GCVDRNECLDLPCLNGATCINLEPRLRYRCICPEGYWGENCELVQEGQRLKL 1545
Fly 1546 SMGALGAIFVCLIIILILALIFVLYSRKRKTTKKKKRSGPEKDVRETVISYEDEGGGEDDMTAFD 1610
Fly 1611 ITPLQIPI--------SAQGG-PPDIAACKMPIIYPVMTLLPP--GQELNVAYLMEERKQRIDKD 1664
Fly 1665 NNAPPFDDLRNFTFEGSGSIAESLSSLAS 1693 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | 32/91 (35%) |
Cadherin_repeat | 140..248 | CDD:206637 | 52/108 (48%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 36/110 (33%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 35/112 (31%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 31/100 (31%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 36/119 (30%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 29/76 (38%) | ||
EGF_CA | 977..1010 | CDD:238011 | 12/32 (38%) | ||
LamG | 1013..1198 | CDD:238058 | 63/189 (33%) | ||
EGF_2 | <1233..1259 | CDD:285248 | 13/30 (43%) | ||
Laminin_G_2 | 1293..1428 | CDD:280389 | 25/149 (17%) | ||
EGF_CA | 1497..1535 | CDD:238011 | 2/37 (5%) | ||
Cadherin_C | 1583..1719 | CDD:279398 | 35/122 (29%) | ||
hmr-1 | NP_001021650.1 | Cadherin_repeat | 431..521 | CDD:206637 | |
Cadherin_repeat | 534..638 | CDD:206637 | |||
Cadherin_repeat | 647..742 | CDD:206637 | |||
Cadherin_repeat | 752..861 | CDD:206637 | |||
Cadherin_repeat | 875..975 | CDD:206637 | |||
Cadherin_repeat | 983..1085 | CDD:206637 | |||
Cadherin_repeat | 1103..1206 | CDD:206637 | |||
Cadherin_repeat | 1216..1331 | CDD:206637 | 5/9 (56%) | ||
Cadherin_repeat | 1340..1432 | CDD:206637 | 32/91 (35%) | ||
Cadherin_repeat | 1443..1542 | CDD:206637 | 51/105 (49%) | ||
Cadherin_repeat | 1553..1657 | CDD:206637 | 35/107 (33%) | ||
Cadherin_repeat | 1666..1768 | CDD:206637 | 38/122 (31%) | ||
Cadherin_repeat | 1779..1868 | CDD:206637 | 28/92 (30%) | ||
EGF_CA | 2250..2283 | CDD:238011 | 12/32 (38%) | ||
LamG | 2286..2459 | CDD:238058 | 63/189 (33%) | ||
LamG | 2533..2679 | CDD:304605 | 29/170 (17%) | ||
Cadherin_C | 2812..>2919 | CDD:279398 | 36/124 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 80 | 1.000 | Domainoid score | I5555 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1193 | 1.000 | Inparanoid score | I98 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4879at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001479 | |
OrthoInspector | 1 | 1.000 | - | - | otm14448 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2878 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.870 |