DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and Cdh4

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_033997.1 Gene:Cdh4 / 12561 MGIID:99218 Length:913 Species:Mus musculus


Alignment Length:839 Identity:213/839 - (25%)
Similarity:340/839 - (40%) Gaps:197/839 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 RNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFL 177
            |.:|.::....|||.:.:..|                   .|::::::.:   |.|..|.|.|.:
Mouse   162 RRQKRDWVIPPINVPENSRGP-------------------FPQQLVRIRS---DKDNDIPIRYSI 204

  Fly   178 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNL 242
            ||.|  .|.|....|:|:..:|.::|.:|:||::   |..:.....|.|..|..:....|:.:.:
Mouse   205 TGVG--ADQPPMEVFNIDSMSGRMYVTRPMDREE---RASYHLRAHAVDMNGNKVENPIDLYIYV 264

  Fly   243 KDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAP- 306
            .|:|||.|:|...:|.|:|.|....|:.|||::|.|.||   ||.|..:  :...::.:...:| 
Mouse   265 IDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTANDADD---STTANGM--VRYRIVTQTPQSPS 324

  Fly   307 --IFEIEPETGLIKTAVCCLDRERTPDYS--IQVVAMDGG---GLKGTGTASIRVKDLNDMPPQF 364
              :|.|..|||.|.|....||||:...|:  :|...|:|.   ||..|.||.|.|.|:||.||:|
Mouse   325 QNMFTINSETGDIVTVAAGLDREKVQQYTVIVQATDMEGNLNYGLSNTATAIITVTDVNDNPPEF 389

  Fly   365 TKDEWVTEVDETNGTYIPETPILTVTVQDEDETNT----FQYKVVPNSGFGADKFAMVRNGDGT- 424
            |...:..||.|..    .||.:..:||.|.|:.::    ..|:::  ||..:..|: ||....| 
Mouse   390 TTSTFAGEVPENR----IETVVANLTVMDRDQPHSPNWNAVYRII--SGDPSGHFS-VRTDPVTN 447

  Fly   425 -GSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDRE 488
             |.:.:::.:|||   .:..|...:.|:::.....|....:. :.:.|.:.:.|:|: .|.|...
Mouse   448 EGMVTVVKAVDYE---LNRAFMLTVMVSNQAPLASGIQMSFQ-STAGVTISVTDVNE-APYFPSN 507

  Fly   489 HIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISD----------RGAVS 543
            |..:.:.|....||.|..|.|.|.|:.....|.|.           .:||          .|.::
Mouse   508 HKLIRLEEGVPAGTALTTFSAVDPDRFMQQAVRYS-----------KLSDPANWLHINTSNGQIT 561

  Fly   544 IQRPLDRET----QDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVS- 603
            ....||||:    .:.:....||.|:|.|..:.|.||.:.:.|:|||||..       ||:... 
Mouse   562 TAAILDRESLYTKNNVYEATFLAADNGIPPASGTGTLQIYLIDINDNAPQL-------LPKEAQI 619

  Fly   604 ----GKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRP 664
                |...:.:.|.|.|  :..|.||:.|.| |.....::..:.:      ...||.....|||.
Mouse   620 CERPGLNAINITAADAD--MDPNIGPYVFEL-PFIPTTVRKNWTI------TRLNGDYAQLSLRI 675

  Fly   665 FDREAQKSYAIPIEIKDNGAPAMTGTSTLTV------------TIGDVNDNKMQPGS-------- 709
            ...|| ..|.:||.:.|:|.|.::.||.:.|            |:|.|....:..|:        
Mouse   676 LYLEA-GVYDVPIIVTDSGNPPLSNTSVIKVKVCPCDENGDCTTVGAVAAAGLGTGAIVAILICI 739

  Fly   710 -----KSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPDK--KYYWE--VQEHQRFKL------DTD 759
                 ..:|...:..:.:.....:..:.||:| ||.|.  ||..|  .:|.|.:.|      :..
Mouse   740 VILLIMVLLFVVWMKRREKERHTKQLLIDPED-DVRDNILKYDEEGGGEEDQDYDLSQLQQPEAM 803

  Fly   760 TGILTMRAGTRRGRYQLRFKVYDREHGQE-------------DI-----------------PANL 794
            ..:|:...|.||        |.:|..|.|             ||                 |...
Mouse   804 EHVLSKTPGVRR--------VDERPVGAEPQYPVRPVVPHPGDIGDFINEGLRAADNDPTAPPYD 860

  Fly   795 SVTVRDI-----TAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAEL 848
            |:.|.|.     ||.:|....|.. |...|.|::..|.|           ||: |||::
Mouse   861 SLLVFDYEGSGSTAGSVSSLNSSS-SGDQDYDYLNDWGP-----------RFK-KLADM 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 5/18 (28%)
Cadherin_repeat 140..248 CDD:206637 25/107 (23%)
Cadherin_repeat 256..359 CDD:206637 39/110 (35%)
CA 388..483 CDD:214520 21/100 (21%)
Cadherin_repeat 489..586 CDD:206637 28/110 (25%)
Cadherin_repeat 594..703 CDD:206637 31/125 (25%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
Cdh4NP_033997.1 Cadherin_pro 30..119 CDD:462590
CA_like 170..270 CDD:481204 29/126 (23%)
Cadherin_repeat 278..385 CDD:206637 40/111 (36%)
Cadherin_repeat 393..500 CDD:206637 25/117 (21%)
Cadherin_repeat 511..608 CDD:206637 27/107 (25%)
CA_like 616..708 CDD:481204 26/101 (26%)
CADH_Y-type_LIR 850..908 CDD:460041 18/70 (26%)
Blue background indicates that the domain is not in the aligned region.

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