DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and Cdh22

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_778153.2 Gene:Cdh22 / 104010 MGIID:1341843 Length:813 Species:Mus musculus


Alignment Length:22 Identity:9/22 - (40%)
Similarity:12/22 - (54%) Gaps:0/22 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GIVLLYSGNGWTQKLTHSHKRT 96
            |.||.:..|..:...:||||.|
Mouse  1549 GSVLSHPSNPPSITSSHSHKST 1570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 9/22 (41%)
Cadherin_repeat 140..248 CDD:206637
Cadherin_repeat 256..359 CDD:206637
CA 388..483 CDD:214520
Cadherin_repeat 489..586 CDD:206637
Cadherin_repeat 594..703 CDD:206637
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
Cdh22NP_778153.2 Cadherin_repeat 80..160 CDD:206637
Cadherin_repeat 169..270 CDD:206637
Cadherin_repeat 279..387 CDD:206637
Cadherin_repeat 398..492 CDD:206637
Cadherin_repeat 499..597 CDD:206637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 696..726
CADH_Y-type_LIR 743..802 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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