DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and cdh16

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_073763310.1 Gene:cdh16 / 101886380 ZFINID:ZDB-GENE-140106-140 Length:819 Species:Danio rerio


Alignment Length:833 Identity:186/833 - (22%)
Similarity:316/833 - (37%) Gaps:238/833 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLTNSTYLVTKFVRIGIADKNDS--PPYFDRFLYETEIDENADLQSTV--LTVNAKDHNESTNIR 70
            :|:.|.:|     :||:.:..|.  |.|..:.         .||..|.  ||||..|.       
Zfish    19 LLSESAHL-----KIGVPENYDGIFPWYLTKL---------PDLPLTYSDLTVNGDDE------- 62

  Fly    71 YQITGGNIGNAFAVQNTTGVIYVASPLDYETRPRYELRLEATRNRKNNYTTVVINVRDVNDNPPV 135
                     ..|.|:  :|.:|...|||.|.:|.|.|::..|::......||.:.|.|.|||.||
Zfish    63 ---------GIFGVE--SGFLYALKPLDREKQPSYSLQVSFTKSMHTQSFTVEVCVIDKNDNVPV 116

  Fly   136 FDRQTYR---------------TQITEEDDRN-------------LPK----RILQVTATDGDVD 168
            |..::.|               .:..:.||||             :|:    .:..:.:..|:|.
Zfish   117 FLEESMRGSVQLGLLKGIPFMQVEALDRDDRNTAHADLRFSLLDQIPRIPASHMFSIDSITGEVS 181

  Fly   169 RPINIVYFLTGQG---IDPD---------------NPANS------------------------- 190
                    ||..|   :||:               ..||:                         
Zfish   182 --------LTEDGASTLDPEMCGRYKLSVMVQDMAGKANAFFSTGTVLVEVTGNAWASPDPVRLQ 238

  Fly   191 --------------------------------KFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVF 223
                                            .|.||| .|.|::..||||:.   :.|:...:.
Zfish   239 ENLPGPYPIPISQVKWSGSPVEYSLEGEFPEMLFTINR-EGIIYLNAPLDRET---QDQFHIDIV 299

  Fly   224 AQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNA 288
            .:...|..:....:::|.:.|.|||.|.|||..|...|.|..|.|:.::|:.|.|.||| ::.|.
Zfish   300 VERPDGREIAKPVELRVMVGDANDNRPTFPQMQYHTVVKELATKGTEILTVQAADNDDP-KTDNV 363

  Fly   289 KLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIR 353
            ::.|.:...:  .||...:|.::.::|:|......:: ...|.|::.:.|.|..||..:.|..::
Zfish   364 RIFYRLVGQM--PETPRNLFRVDRDSGVITVQADSME-GTAPQYTLTITAEDAKGLNSSCTVIVK 425

  Fly   354 VKDLNDMPPQFTKDEW----VTEVDETNGTYIPETPILTVTVQDEDE--TNTFQYKVVPNSGFGA 412
            |.|.|:.||.|:..|:    :.| |.:.|     |.:..|:..|.||  .:::|......||...
Zfish   426 VLDENNNPPIFSHLEYGPFHLAE-DSSVG-----TTVTVVSAWDADEWGGDSWQVDYRLESGNEE 484

  Fly   413 DKFAMVRNGDGTGSLKII--QPLDYEDPLQSSGFRFRIQVND-----KGDDGPGGSDKYHVAYSW 470
            :.|.:: |...|....:|  :.||:|   :.:.:...:...:     :|..||..:       :.
Zfish   485 EVFTLL-NDRQTNEAALILDKVLDFE---RENEYILVLSAQNPVALVRGRYGPAST-------AT 538

  Fly   471 VVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFA 535
            |.:.:.|||:. |...:.|.||::.|..:.|.::...:..|.|.   ..:.|.:...|  ||.|:
Zfish   539 VTIFIDDINEG-PVLSQSHYEVTVREGEEPGRVIATIRGYDPDS---HPIRYSLRGDT--KRYFS 597

  Fly   536 ISD-RGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYK---- 595
            |.. .|.:...:.||||....:.::::|.|..:.:.:|:..:||.:.|||||:|....||.    
Zfish   598 IGKYSGELKTVQALDREENHTYTMEVVAEDGRNSSLSASTLVTVHILDVNDNSPVLVGDYSWKYL 662

  Fly   596 --PTLPENVSGKKILEVAAKDPDDRLRGNGGPF----------TFRLDPLASDEIKAGFKVEYDR 648
              |...:     :.|.:|::|.|....|....|          |::|.|:..........|.|  
Zfish   663 CTPRWED-----QALVLASRDSDGPQHGGRLNFSLRSDATVRRTWKLTPINDTHTNLSLNVPY-- 720

  Fly   649 RGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVN 701
                         |.|      :.|.:|..|.|:.:|..:....|.||:...|
Zfish   721 -------------LPP------EVYIVPFTISDSSSPPRSTFINLPVTVCPCN 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 25/92 (27%)
Cadherin_repeat 140..248 CDD:206637 30/214 (14%)
Cadherin_repeat 256..359 CDD:206637 27/102 (26%)
CA 388..483 CDD:214520 21/103 (20%)
Cadherin_repeat 489..586 CDD:206637 26/97 (27%)
Cadherin_repeat 594..703 CDD:206637 24/124 (19%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
cdh16XP_073763310.1 None
Blue background indicates that the domain is not in the aligned region.

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