DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and CDH17

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_001400880.1 Gene:CDH17 / 1015 HGNCID:1756 Length:851 Species:Homo sapiens


Alignment Length:734 Identity:198/734 - (26%)
Similarity:316/734 - (43%) Gaps:122/734 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDHNE----STNIRYQIT--GGNIGN 80
            :.|.:.|.||:.|.|.:..||..:.:|:......|.|||.|.::    :..:.|||.  ...|.|
Human   112 ITIKVKDINDNRPTFLQSKYEGSVRQNSRPGKPFLYVNATDLDDPATPNGQLYYQIVIQLPMINN 176

  Fly    81 A--FAVQNTTGVIYVASPLDYETRPRYELRLEATRNRKNNYTTVVINVRDV---NDNPPVFDRQT 140
            .  |.:.|.||.|.:......|..|           .||....:||:|:|:   ::|.  |...|
Human   177 VMYFQINNKTGAISLTREGSQELNP-----------AKNPSYNLVISVKDMGGQSENS--FSDTT 228

  Fly   141 YRTQITEEDDRNLPKRILQV-TATDGDVDRPINIV----------YFLTGQGIDPDNPANSKFDI 194
            ....|..|:....||.:..| .:||   ..||.|.          |.|    :|.:......|.|
Human   229 SVDIIVTENIWKAPKPVEMVENSTD---PHPIKITQVRWNDPGAQYSL----VDKEKLPRFPFSI 286

  Fly   195 NRTTGDIFVLKPLDRDQPNG--------RPQ--------WRFTVFAQDEGGEGLVGYADIQVNLK 243
            :: .|||:|.:||||::.:.        |.|        :.|...|:||.|:.|....:|.|.:|
Human   287 DQ-EGDIYVTQPLDREEKDAVSKREEFHRRQDKVLCPSTYVFYAVAKDEYGKPLSYPLEIHVKVK 350

  Fly   244 DINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAP-- 306
            |||||.|..|..:....|.||...|:|:.|::|.|.|:.| :.|:.|.|    .::|:....|  
Human   351 DINDNPPTCPSPVTVFEVQENERLGNSIGTLTAHDRDEEN-TANSFLNY----RIVEQTPKLPMD 410

  Fly   307 -IFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDLNDMPPQFTKDEW- 369
             :|.|:...|:::.|...|.::.||.|::.:...| ...|......|.|.|:||..|.|.|.:: 
Human   411 GLFLIQTYAGMLQLAKQSLKKQDTPQYNLTIEVSD-KDFKTLCFVQINVIDINDQIPIFEKSDYG 474

  Fly   370 -VTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGD---GTGSLKII 430
             :|..::||   |..| |||:...|.||..|...|::.:...|..:..:..:.|   .||.:.|.
Human   475 NLTLAEDTN---IGST-ILTIQATDADEPFTGSSKILYHIIKGDSEGRLGVDTDPHTNTGYVIIK 535

  Fly   431 QPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHV-AYSWVVVKLRDINDNVPKFDREHIEVSI 494
            :|||:|....|:     |....:..:......||:. :::...:.:.|:|: .|:|.:...:..:
Human   536 KPLDFETAAVSN-----IVFKAENPEPLVFGVKYNASSFAKFTLIVTDVNE-APQFSQHVFQAKV 594

  Fly   495 YEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQR---------PLDR 550
            .||..:||.:....|.|.:   ...::|.:...|          ||.:.|..         ||||
Human   595 SEDVAIGTKVGNVTAKDPE---GLDISYSLRGDT----------RGWLKIDHVTGEIFSVAPLDR 646

  Fly   551 ETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTL---PENVSGKKILEVAA 612
            |....:.:|::|.:.|..:.::.:...:|:.|||||.|..|:||....   |.:..|..|.|  |
Human   647 EAGSPYRVQVVATEVGGSSLSSVSEFHLILMDVNDNPPRLAKDYTGLFFCHPLSAPGSLIFE--A 709

  Fly   613 KDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPI 677
            .|.|..| ..|..|||   .|.|..::..::|      ...||.....|.|..:.| ::.|.:.|
Human   710 TDDDQHL-FRGPHFTF---SLGSGSLQNDWEV------SKINGTHARLSTRHTEFE-EREYVVLI 763

  Fly   678 EIKDNGAPAMTGTSTLTVT 696
            .|.|.|.|.:.|..:|.||
Human   764 RINDGGRPPLEGIVSLPVT 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 26/101 (26%)
Cadherin_repeat 140..248 CDD:206637 38/134 (28%)
Cadherin_repeat 256..359 CDD:206637 28/105 (27%)
CA 388..483 CDD:214520 21/98 (21%)
Cadherin_repeat 489..586 CDD:206637 23/105 (22%)
Cadherin_repeat 594..703 CDD:206637 31/106 (29%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
CDH17NP_001400880.1 Cadherin_repeat 33..122 CDD:206637 3/9 (33%)
Cadherin_repeat 131..235 CDD:206637 30/116 (26%)
CA 271..357 CDD:214520 29/90 (32%)
Cadherin_repeat 365..463 CDD:206637 28/103 (27%)
Cadherin_repeat 475..581 CDD:206637 27/114 (24%)
Cadherin_repeat 589..682 CDD:206637 23/105 (22%)
CA_like 700..784 CDD:481204 29/96 (30%)
Blue background indicates that the domain is not in the aligned region.

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