DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and CDH11

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_001788.2 Gene:CDH11 / 1009 HGNCID:1750 Length:796 Species:Homo sapiens


Alignment Length:817 Identity:213/817 - (26%)
Similarity:328/817 - (40%) Gaps:223/817 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 VTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFA 224
            :.:.||      ||.|.|:|:|      |.:.|.|:..:|:|...|.|||::   |.|:.....|
Human    81 IDSGDG------NIKYILSGEG------AGTIFVIDDKSGNIHATKTLDREE---RAQYTLMAQA 130

  Fly   225 QD-EGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNA 288
            .| :....|...::..|.::|||||.|:|....|..||.|....|:||:.::|.|.|||....:|
Human   131 VDRDTNRPLEPPSEFIVKVQDINDNPP
EFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSA 195

  Fly   289 KLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD----GGGLKGTGT 349
            ||:|||.:       |.|.|.:|.:||:|:||:..:|||...:|.:.:.|.|    .|||.||..
Human   196 KLVYSILE-------GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTK 253

  Fly   350 ASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED--ETNTFQYKVVPNSGFGA 412
            .:|.:.|:||.||:|.:..:...|.|   ..:|...:..|..:|.|  |.....|.:|  .|.|.
Human   254 VTITLTDVNDN
PPKFPQSVYQMSVSE---AAVPGEEVGRVKAKDPDIGENGLVTYNIV--DGDGM 313

  Fly   413 DKFAMVRNGD-GTGSLKIIQPLDYE----------------DPLQSSGFRFRIQVNDKGDDGPGG 460
            :.|.:..:.: ..|.:|:.:|:|:|                ||...|...|:..|.         
Human   314 ESFEITTDYETQEGVIKLKKPVDFETKRAYSLKVEAANVHIDPKFISNGPFKDTVT--------- 369

  Fly   461 SDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIV 525
                      |.:.:.|. |..|.|........:.|:...||::.:..|.|.| ..:|.:.|.|.
Human   370 ----------VKISVEDA-DE
PPMFLAPSYIHEVQENAAAGTVVGRVHAKDPD-AANSPIRYSID 422

  Fly   526 RSTNRKRQFAIS-DRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPT 589
            |.|:..|.|.|: :.|.:...:|||||.....:|.:.|.:..:..:.|...:.:.|.|||||||.
Human   423 RHTDLDRFFTINPEDGFIKTTKPLDREETAWLNITVFAAEIHNRHQEAKVPVAIRVLDVNDNAPK 487

  Fly   590 FAQDYKPTLPEN-----VSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEI--KAGFKVEYD 647
            ||..|:..:.|:     :|.:.|:.::|.|.||  ..||..|.|.|.|    ||  ...|.|   
Human   488 FAAPYEGFICESDQTKPLSNQPIVTISADDKDD--TANGPRFIFSLPP----EIIHNPNFTV--- 543

  Fly   648 RRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI--GDVND-------- 702
             |.:.:|...:.:....|.|:.|..|.:||.|.|.|.|.|:.|:|||:.:  .|||.        
Human   544 -RDNRDNTAGVYARRGGFSRQKQDLYLLPIVISDGGIPPMSSTNTLTIKVCGCDVNGALLSCNAE 607

  Fly   703 -----------------------------------NKMQP--------GSKSVLVYNYQ-GQSQD 723
                                               .|.:|        ..::::.|:.: |..:|
Human   608 AYILNAGLSTGALIAILACIVILLVIVVLFVTLRRQKKEPLIVFEEEDVRENIITYDDEGGGEED 672

  Fly   724 TPIGRV-YVNDPDDWD--VPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDREH 785
            |....: .:.:||..:  :|.|....|.|             ...|.|.|               
Human   673 TEAFDIATLQNPDGINGFIPRKDIKPEYQ-------------YMPRPGLR--------------- 709

  Fly   786 GQEDIPANLSVTVRDITAEAVQQA--------------------GSM--RLSHI--------TDE 820
                 ||..||.|.|.....:|:|                    ||:  .||.:        .|.
Human   710 -----PAPNSVDVDDFINTRIQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDY 769

  Fly   821 DFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDNVD 857
            |:::.|.|           ||: |||: ||..:|..|
Human   770 DYLQNWGP-----------RFK-KLAD-LYGSKDTFD 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 26/88 (30%)
Cadherin_repeat 256..359 CDD:206637 40/106 (38%)
Cadherin_repeat 379..481 CDD:206637 22/120 (18%)
Cadherin_repeat 489..586 CDD:206637 27/97 (28%)
Cadherin_repeat 594..703 CDD:206637 38/160 (24%)
Cadherin_repeat 724..801 CDD:206637 15/79 (19%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
CDH11NP_001788.2 CA 79..157 CDD:214520 28/90 (31%)
Cadherin_repeat 163..264 CDD:206637 41/107 (38%)
Cadherin_repeat 272..379 CDD:206637 24/131 (18%)
Cadherin_repeat 387..484 CDD:206637 27/97 (28%)
CA 514..598 CDD:214520 32/93 (34%)
Cadherin_C 641..789 CDD:307269 38/193 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5199
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.010

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