DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and cdh10b

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_073774932.1 Gene:cdh10b / 100534755 ZFINID:ZDB-GENE-130530-1019 Length:776 Species:Danio rerio


Alignment Length:553 Identity:178/553 - (32%)
Similarity:268/553 - (48%) Gaps:82/553 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 NIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQ---DEGGEGLV 233
            |:.|.|||:|      |.:.|:|:..:|||...:.|||::     :..:|:.|:   ...|:.|.
Zfish    77 NVKYVLTGEG------AGTVFEIDENSGDIHATRRLDREE-----KASYTLSAKAVNKTSGQDLE 130

  Fly   234 GYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNV 298
            ..::..:.:.|||||.|:|.:..|..:|:|....|:.||.::|.|.||.....:|||:|||.:  
Zfish   131 RASEFIIKIHDINDNEPKFAKDTYVASVSEMSNVGAFVMKVTASDADDEAYGNSAKLVYSILQ-- 193

  Fly   299 IEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD----GGGLKGTGTASIRVKDLND 359
                 |.|.|.||||||:|:||:..:.||....|.:.:.|.|    .|||.||.|.:|.:.|:|:
Zfish   194 -----GQPYFSIEPETGVIRTALPNMIRENREHYQVVIQAKDMAGQMGGLSGTTTVNITLLDVNN 253

  Fly   360 MPPQFTKDEW------VTEVDETNGTYIPETPILTVTVQDED--ETNTFQYKVVPNSGFGADKFA 416
            .||:|....:      .||:..:.|         .:...|.|  |.....|.::  .|.|.|.|.
Zfish   254 SPPRFPHSNYHLSTPESTEIGSSVG---------RIKAYDADVGENAEMWYSIL--EGDGQDVFN 307

  Fly   417 MVRNGDGT---GSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDD------GPGGSDKYHVAYSWVV 472
            ::.  |.|   |.:.:.:.||||   ....:..|:||.:...|      || .||.     :.|.
Zfish   308 IIT--DSTSQEGVIMVKKQLDYE---SRRLYSLRVQVTNTHIDRRFEQQGP-FSDT-----AIVR 361

  Fly   473 VKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAI- 536
            :.:.|: |..|.|.|......:.||:.||:.:....|.|.|...| .|.|.|.|.|:.:|.|.| 
Zfish   362 ITVTDV-DEPPVFSRALYIFEVDEDSPVGSSIGIVSARDPDTISH-LVKYTIDRHTDLERLFNID 424

  Fly   537 SDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPEN 601
            |:.|.:|..:.|||||...|:|.:||.:..:..:|..... :.|:|||||||.||.|::..:.||
Zfish   425 SNNGTISTLQALDRETSKWHNISVLATELSTALQTRVPVF-IKVRDVNDNAPEFAMDFQTIVCEN 488

  Fly   602 V-SGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRP- 664
            . :|:.|..::|.|.|:.|.|:  .|.|.|     ..|...|.:     .|||:..|.|.:.|. 
Zfish   489 ARAGQAIQTISAVDTDEPLVGH--KFVFSL-----SVINPNFTI-----FDNEDNTAQILTRRSG 541

  Fly   665 FDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI 697
            |:|....||.:|:.|.||..|..:.||||||.:
Zfish   542 FNRREVSSYLLPVIISDNDYPIQSSTSTLTVRV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 22/78 (28%)
Cadherin_repeat 256..359 CDD:206637 41/106 (39%)
CA 388..483 CDD:214520 26/105 (25%)
Cadherin_repeat 489..586 CDD:206637 33/97 (34%)
Cadherin_repeat 594..703 CDD:206637 35/106 (33%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
cdh10bXP_073774932.1 None
Blue background indicates that the domain is not in the aligned region.

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