Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012820890.2 | Gene: | cdh20 / 100498629 | XenbaseID: | XB-GENE-1011620 | Length: | 796 | Species: | Xenopus tropicalis |
Alignment Length: | 770 | Identity: | 191/770 - (24%) |
---|---|---|---|
Similarity: | 347/770 - (45%) | Gaps: | 154/770 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 NIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEG-GEGLVGY 235
Fly 236 ADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIE 300
Fly 301 EETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDG----GGLKGTGTASIRVKDLNDMP 361
Fly 362 PQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRN-GDGTG 425
Fly 426 SLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAY---------SWVVVKLRDINDN 481
Fly 482 VPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAIS-DRGAVSIQ 545
Fly 546 RPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVSGKKILE- 609
Fly 610 VAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRP-FDREAQKSY 673
Fly 674 AIPIEIKDNGAPAMTGTSTLTVTI------GDVNDNKMQPGS----------------------- 709
Fly 710 ------------------------KSVLVYNYQGQSQDTPIGRVYVNDPDDWDV-----PDKKYY 745
Fly 746 WEVQEHQRFKLDTDTGILTM--RAGTRRGRYQLRFKVYDREHGQEDIPA----NLSVTVRDITAE 804
Fly 805 AVQQAGSMRLSHITDE----DFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDN 855 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 22/76 (29%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 36/106 (34%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 17/111 (15%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 32/97 (33%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 32/116 (28%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 12/87 (14%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
cdh20 | XP_012820890.2 | CA | 84..162 | CDD:214520 | 24/78 (31%) |
Cadherin_repeat | 168..269 | CDD:206637 | 37/107 (35%) | ||
Cadherin_repeat | 277..384 | CDD:206637 | 19/122 (16%) | ||
Cadherin_repeat | 392..489 | CDD:206637 | 32/97 (33%) | ||
Cadherin | 497..594 | CDD:394985 | 30/105 (29%) | ||
Cadherin_C | 642..788 | CDD:395833 | 28/171 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9756 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |