Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935630.3 | Gene: | cdh10 / 100496218 | XenbaseID: | XB-GENE-1012079 | Length: | 787 | Species: | Xenopus tropicalis |
Alignment Length: | 797 | Identity: | 205/797 - (25%) |
---|---|---|---|
Similarity: | 334/797 - (41%) | Gaps: | 196/797 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 166 DVDR-PINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQ---D 226
Fly 227 EGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLI 291
Fly 292 YSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD----GGGLKGTGTASI 352
Fly 353 RVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAM 417
Fly 418 VRNGDGT-------------GSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAY- 468
Fly 469 ------SWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRS 527
Fly 528 TNRKRQFAI-SDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFA 591
Fly 592 QDYKPTLPENV-SGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENG 655
Fly 656 VA-IISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI---------------------- 697
Fly 698 ---------------------------------------GDVNDNKMQPGSKSVLVYNYQG---- 719
Fly 720 QSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDR- 783
Fly 784 -EHGQE------DIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERF 841
Fly 842 RNKLAELL---YTDRDN 855 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 22/85 (26%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 40/106 (38%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 21/121 (17%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 29/97 (30%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 34/171 (20%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 17/84 (20%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
cdh10 | XP_002935630.3 | CA | 79..157 | CDD:214520 | 24/87 (28%) |
Cadherin_repeat | 163..264 | CDD:206637 | 41/107 (38%) | ||
Cadherin_repeat | 272..379 | CDD:206637 | 22/132 (17%) | ||
Cadherin_repeat | 387..484 | CDD:206637 | 29/97 (30%) | ||
Cadherin | 492..586 | CDD:394985 | 33/105 (31%) | ||
Cadherin_C | 634..781 | CDD:395833 | 38/178 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 129 | 1.000 | Domainoid score | I5175 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |