DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and LOC100494953

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_031759339.1 Gene:LOC100494953 / 100494953 XenbaseID:XB-GENE-29082483 Length:2999 Species:Xenopus tropicalis


Alignment Length:1823 Identity:622/1823 - (34%)
Similarity:916/1823 - (50%) Gaps:234/1823 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TKFVRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDHNESTN--IRYQITGGNIGNA 81
            |.:|||.::|.||:.|.|....|||.::|:.|:...|:||||.|.:|..|  :|||||.||....
 Frog  1300 TAYVRIFVSDVNDNAPRFPMQRYETSVEEDKDVGYVVITVNASDEDEGANAKLRYQITNGNSKGI 1364

  Fly    82 FAVQNTTGVIYVASPLDYETRPRYELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQIT 146
            |.|....|.|::...|:||...::||||.|:..:..|:|.|:|||.::||..|:|.:..:...|.
 Frog  1365 FDVDQEIGAIFITQALNYEQDTQFELRLVASDGKWENHTLVLINVINLNDEVPIFSQTEFHGSIL 1429

  Fly   147 EEDDRNLPKRILQVTATDGDVDRPIN-IVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRD 210
            |. ..:||..:|||:|||.|.:...: :.|.|.|||      |||:|.|::..|.|::.|.|||:
 Frog  1430 EA-ITDLPVYVLQVSATDPDQEADQSALQYSLHGQG------ANSEFIIDQFNGKIYIQKELDRE 1487

  Fly   211 QPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQF---PQGIYFGNVTENGTAGSSVM 272
            |   |..|||.|.|.||.||||.|:||:.:::||:|||.|.|   ..|.:.|.:.||..|.::||
 Frog  1488 Q---RATWRFLVLATDENGEGLTGFADVIIDVKDVNDNEPTFLCTTDGCFMGYIPENSPADTTVM 1549

  Fly   273 TMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVV 337
            .|:|.|.|||....||.|.|.|.:|| :.|....:|.|.|.||.|.|.:..||||:...|.|.|.
 Frog  1550 EMTAFDLDDPKSGRNALLTYRIVQNV-QNEINLNLFAIHPSTGSIYTVLGSLDREKNDKYLIVVE 1613

  Fly   338 AMDGGGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQY 402
            |.|||||.|||||:|.:.|:||..|.||::.:...|.| |.|...|..:|.....||.|.....:
 Frog  1614 AKDGGGLSGTGTATILISDINDHAPVFTQNVYTAMVPE-NFTINSEVAVLYAWDLDEGENAMMTF 1677

  Fly   403 KVVPNSGFGAD---KFAMVRNG-DGTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDK 463
            .::     |.|   ||.:..:. ...|.:::.:.:||| .:....|...::|.|        .|.
 Frog  1678 SII-----GGDDDRKFFIETDKIHKRGIIRLRKKMDYE-RIHERSFNLTVKVED--------MDF 1728

  Fly   464 YHVAYSWVVVKLRDINDNVPKFDREHIE-VSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRS 527
            |.:||  .|:::.|.||:.|.|....:| :|:.||..:||.:....|.|.|.|.:.|.:|.|:.|
 Frog  1729 YSIAY--CVIQVEDSNDHAPVFYPAVLEAISLPEDVSIGTTVVHLSAIDLDSGQNGKFSYHILNS 1791

  Fly   528 TNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQ 592
            ::....|:::..|.|.:...|||||...|::.|||.|.|.||.|.:.::.:|:.|||||||.|..
 Frog  1792 SDVGGLFSVATDGWVVVAGHLDRETLAEHNLVILATDLGEPALTGSTSVLIIIGDVNDNAPEFEA 1856

  Fly   593 DYKPTLPENVSGKKILEV-------AAKDPDDRLRGNGGPFTFRL--DPLASDEIKAGFKVEYDR 648
            .|.|.:.||.....||:|       ..:|.|..:  ||.||.|.|  ||         |.|....
 Frog  1857 QYSPMIWENTESPHILQVNKTSTLLHVRDNDTEV--NGAPFAFSLVHDP---------FNVHDFS 1910

  Fly   649 RGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVL 713
            ..|..||.|||:.||.||||..:.:.:||.|.|:|.|.::.|:|||:.|||:||:....|.....
 Frog  1911 LQDLHNGSAIITVLRSFDREVHQVFYLPILITDSGNPPLSSTNTLTILIGDINDHPHSSGHLDCT 1975

  Fly   714 VYNYQGQSQDTPIGRVYVNDPDDWDVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRF 778
            ||:|:|......:|:|...|.|:|:  .|.||.| .:.:.|.|:..||:|||:.|...|.|:||.
 Frog  1976 VYSYKGILPTVTLGKVPAPDLDEWE--HKMYYLE-GKSRVFSLNEATGLLTMKEGAIPGVYKLRV 2037

  Fly   779 KVYDREHGQEDIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRN 843
            ||.|..  ..|:.:.:.:.|.|||.||...|.|:|:|..|.||||     ::...:.||.|..:.
 Frog  2038 KVSDGT--WPDVISTVRIVVHDITEEAALNAISVRISGFTAEDFV-----LRPPDKISKYELMKY 2095

  Fly   844 KLAELLYTDRDNVDVFSVQLKEGSPYPLTDVHFAARSATQQPYFKAVRLNGVVQMHREEIEKDVG 908
            .|.|:|..:.||:.:||| |.........|:.||....|:.   :|.:|||:|...||:||..:|
 Frog  2096 LLLEILQAELDNIHIFSV-LNTPGLSGCMDIWFAVSGDTRH---QAEKLNGIVASSREKIESTLG 2156

  Fly   909 LNITMVNINECLHEGKGKCG-SNSCTSKVELGKKPYTVSVNRTALVGVRLDISAQCVCRARNFTH 972
            :.:|.:...||.:.   ||. ...|..:....:.|..::....:...|.:...|.|.|.:|.  |
 Frog  2157 VQVTQIGEYECENV---KCSHQTGCLVRSSYKQTPTMITAGSVSFGSVTILTKALCSCPSRE--H 2216

  Fly   973 QDHNCRTH---LCYNGGRCVETRNGPKCVACPVGYNGPRCQQSTRSFRGNGWAWYPPLQLCQESH 1034
            |..:|.::   .|.|||.||:...|.:| .||:.::||.|||:..:|.|.|:||:||:.||.||.
 Frog  2217 QHLSCSSYERNPCLNGGICVDGNMGYRC-ECPLSFHGPECQQTKHTFIGQGYAWFPPMALCYESQ 2280

  Fly  1035 LSLEFITRVADGLILYNGPIVPPKPEETVISDFIALELEQGYPRLLIDFGSGTLELRVKTKKTLD 1099
            :||:|||...:||:|:|||:.|.|..:|  .|||||||:.|.|.|.|:.|||||.|:..||:.|.
 Frog  2281 ISLDFITEKGNGLLLFNGPMSPSKYRQT--EDFIALELQNGSPLLAINHGSGTLLLQFSTKQNLA 2343

  Fly  1100 DGVWHRLDIFWDTENVRMVVDFCRTALVSEMEDGTPPEFDDNACQARGQIPPFAESLNLNQPLQL 1164
            |..||.:.|..:.:.|:|::|.|..||.:|.:....|..|.::|:.....|.....|::.|||||
 Frog  2344 DRRWHNIRIESNGKKVKMILDHCSDALANEADGIRQPLHDRSSCEVSTGTPGNKRFLDVYQPLQL 2408

  Fly  1165 GGLYRQHFDQTLYNWQYAFSSKGFDGCIRNVIHNSEHYDLAFPALARNSFPACPQTDEVCLKTEH 1229
            ||:  :|...:|:.   |....||.||:||:..:|:.|||..|..:.||.|.|..||.:|..| .
 Frog  2409 GGV--KHVLPSLHP---ALQFSGFIGCLRNLKVDSKVYDLEQPLESLNSIPGCTMTDGLCAVT-G 2467

  Fly  1230 TARCWEHGNCVASLVQAKCHCQPGWMGPGCNVPTIPTTFKAQSYVKFALSFEPDRFSTQLQLRFR 1294
            :..|..||.|::.|...:|||.||:.|..|........|:..|::.:.|...|...|..:||..|
 Frog  2468 SPPCGGHGFCISDLSSIRCHCHPGYHGDNCETVLQEWNFEKDSWIHYQLHILPSLHSLSVQLMVR 2532

  Fly  1295 TREQGGELFRVSDQHHREYAILELRRGHLQFRYNLNSMRNEEQLLTLTAIAVNDGQWHVIRISRY 1359
            ||.....:......:...:..||:..|:...|:|..   ..|.|:||.|:.::.|||..:...||
 Frog  2533 TRMASCTILSFVSTNKSSFLRLEVVEGNFAVRFNFG---EREHLITLPALRIDHGQWTSLSFERY 2594

  Fly  1360 GSAALMELDGGESRRYNESFHFTGHQWLTIDKQEGVYAGGKAEYTGI----KTFEVQS------- 1413
            .::                  ||    |.|:|     .||..|.|.:    :.|:|.|       
 Frog  2595 DNS------------------FT----LMINK-----GGGDHELTSVMGTSRLFDVDSSSILLGT 2632

  Fly  1414 --------DFQRSCLDDIRLDGKHLPLPPAMNGTQWGQATMARNLERNCPSNRPCSNVICPDPFD 1470
                    ||| .||.||||:|:||||....||  :......:.:.|.|.|: .|.:..|..|.:
 Frog  2633 SLLQGGRNDFQ-GCLRDIRLNGRHLPLDGLENG--YSSTVSVQGVSRGCHSD-ACRSQPCQSPLN 2693

  Fly  1471 CVDLWNEYECTC--SEGRIMSSDT--KGCVDRNECLDLPCLNGATCINLEPRLRYRCICPEGYWG 1531
            |:|||.:|||.|  .|..::::.|  |.|.. :.|:...|.||.||: .:...:|.|.|.:||.|
 Frog  2694 CIDLWRKYECRCPADEVEVINNMTGQKHCYP-SPCMRWSCRNGGTCV-AQSHQKYVCQCRDGYKG 2756

  Fly  1532 ENCELVQ--EGQRLKLSMGALGAIFVCLIIILILALIFVLYSRKRKTTKKKKRSG-----PE--- 1586
            ..||.:|  ..:.:.||.|::.||.:||:|.:.|.:.:.::|  :..:.|..:.|     ||   
 Frog  2757 RICESIQINTAKMIGLSSGSILAISMCLLIFIALLVSYTVWS--QWGSSKFHKGGVYHIPPEHES 2819

  Fly  1587 -KDVRETVISYEDEGGGEDDM--------------------TAFDITPLQIPISAQGGPPDIAAC 1630
             :|:||:||::.:|.|.|.:.                    ..:|...|:.|:  :.....:.:.
 Frog  2820 WEDIRESVINFSEESGIEHNQCWKKASKASGEVVHKSTKITNGYDKHKLKRPL--RENVQQLCSS 2882

  Fly  1631 KMPIIYPVMTLLP--------PGQELNVAYLMEERKQRIDKDNNAPPF----------------- 1670
            :..::.|    .|        .|:..|..:    .|.:|..:|..|.|                 
 Frog  2883 ENDLVLP----RPHQPAEESHTGKSTNATF----HKLQISTENRHPSFQFYVPQMLWAADNDMKS 2939

  Fly  1671 ---DDLRNFTFEGSGSIAESLSSLASGTDDENQDFNY--LQNWGPRFNALAAMYVHDKAKASSQL 1730
               |.|.::|.||.||...|||||.|.:.||  ||||  ||.||.:|:.|..:|         :.
 Frog  2940 HPPDLLHSYTTEGQGSPTGSLSSLDSSSTDE--DFNYDVLQEWGSKFDRLKELY---------RS 2993

  Fly  1731 PSD 1733
            |||
 Frog  2994 PSD 2996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 39/92 (42%)
Cadherin_repeat 140..248 CDD:206637 46/108 (43%)
Cadherin_repeat 256..359 CDD:206637 47/102 (46%)
CA 388..483 CDD:214520 22/98 (22%)
Cadherin_repeat 489..586 CDD:206637 35/97 (36%)
Cadherin_repeat 594..703 CDD:206637 45/117 (38%)
EGF_CA 977..1010 CDD:238011 13/35 (37%)
LamG 1013..1198 CDD:238058 77/184 (42%)
EGF_2 1233..1259 CDD:400365 11/25 (44%)
LamG 1265..1426 CDD:238058 45/179 (25%)
EGF_CA 1497..1535 CDD:238011 12/37 (32%)
CADH_Y-type_LIR 1662..1719 CDD:460041 28/78 (36%)
LOC100494953XP_031759339.1 PHA03247 <51..374 CDD:223021
Cadherin_repeat 475..564 CDD:206637
Cadherin_repeat 575..667 CDD:206637
Cadherin_repeat 681..769 CDD:206637
Cadherin_repeat 778..877 CDD:206637
Cadherin_repeat 890..986 CDD:206637
Cadherin_repeat 995..1083 CDD:206637
Cadherin_repeat 1095..1198 CDD:206637
Cadherin_repeat 1207..1313 CDD:206637 6/12 (50%)
Cadherin_repeat 1322..1414 CDD:206637 38/91 (42%)
Cadherin_repeat 1423..1522 CDD:206637 46/108 (43%)
Cadherin_repeat 1537..1636 CDD:206637 47/99 (47%)
Cadherin_repeat 1644..1744 CDD:206637 27/116 (23%)
Cadherin_repeat 1756..1850 CDD:206637 34/93 (37%)
Cadherin_repeat 1857..1965 CDD:206637 45/118 (38%)
EGF_CA 2221..2256 CDD:238011 13/35 (37%)
LamG 2261..2437 CDD:238058 77/182 (42%)
EGF_CA <2470..2498 CDD:238011 11/27 (41%)
LamG 2526..2654 CDD:214598 41/158 (26%)
EGF_CA <2732..2760 CDD:238011 11/28 (39%)
CADH_Y-type_LIR 2933..2991 CDD:460041 25/59 (42%)
Blue background indicates that the domain is not in the aligned region.

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