DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and fat3

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_031753199.1 Gene:fat3 / 100493675 XenbaseID:XB-GENE-979369 Length:4613 Species:Xenopus tropicalis


Alignment Length:1909 Identity:437/1909 - (22%)
Similarity:707/1909 - (37%) Gaps:518/1909 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PLKIFWV-----LTNSTYLVTKFVRIGIADKNDSPPYFDRFLYETEIDENADLQSTVLTVNAKDH 63
            |:.||.|     |......:|..|.:.|.|.||:.|.|....||..|.|...:.:.::.|.|.|.
 Frog  2802 PVFIFKVAASVPLDMVDIFITVDVEVKILDLNDNKPVFVSSYYEAVIMEGMPIGTNIIQVKATDA 2866

  Fly    64 NESTN--IRYQIT----GGNIGNAFAVQNTTGVIYVASPLDYETRPRYELRLEAT---RNRKNNY 119
            :...|  :.|.:.    ...|...|.:.:.:|.|.....:|:|..|.|...:.|:   .....:.
 Frog  2867 DWGANGQVTYSLVPEREEDKILETFTIDSNSGWISTLKDMDHEKHPTYMFTVVASDLGETLSLSS 2931

  Fly   120 TTVV-INVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTAT----DGDVDRPINIVYFLTG 179
            |.:| :.|.|||||.|||:.:.|:..:.|.|   .|..::.|.:|    ..:|:|.::  |.:||
 Frog  2932 TAIVSVTVTDVNDNGPVFEHEVYKGSVKESD---TPGEVVAVLSTWDEDTSEVNRQVS--YHITG 2991

  Fly   180 QGIDPDNPANSKFDINRTTGD--IFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGL-VGYADIQVN 241
                 .|| ..||.:.....:  ::|.:||||::   :..:...:.|.|    || |....::|.
 Frog  2992 -----GNP-KGKFALGLIQNEWKVYVKRPLDREE---QDLYLLNITATD----GLYVSQMAVEVM 3043

  Fly   242 LKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAP 306
            :.|:|||:|...|...|.:..|:......:|.:||.|.|   ...||::.||:      ...|:.
 Frog  3044 VIDVNDNSPVCEQVANFASFPEDIPPNKMIMKISARDAD---IGANAEIHYSL------HGPGSD 3099

  Fly   307 IFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDLNDMPPQFTKDEWVT 371
            .|.::.|||.:|| :..||||..|.|::...|.||||........:.::|:||.||.|:.:.:..
 Frog  3100 HFYLDSETGELKT-LLPLDRETVPVYNLYARATDGGGRYCQSEIRLILEDVNDNPPMFSSEHYSA 3163

  Fly   372 EVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGDG-------TGSLKI 429
            .|.|..     .|..|...||..|.......|||         :::|.:.||       :|.:.:
 Frog  3164 SVYENT-----VTKTLLTRVQANDPDVGINRKVV---------YSLVDSADGHFAVDMSSGIIIL 3214

  Fly   430 IQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHV----AYSWVVVKLRDINDNVPKFDREHI 490
            .||||.|  ||||   :.|.|.        .||...|    :.::|.:.:.|:|||.|.|:|...
 Frog  3215 EQPLDRE--LQSS---YNITVK--------ASDLSPVLTLSSLAFVTITVLDVNDNPPIFERRDY 3266

  Fly   491 EVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDR-GAVSIQRPLDRETQD 554
            .|::.|||.:||.:....|...|.|.::::.|.| ||.|...||.|:.: ||:|:...||.|...
 Frog  3267 WVTVAEDTTLGTKVLSVFAASKDIGTNAEILYSI-RSGNEHAQFFINPKTGAISVVNTLDYENCK 3330

  Fly   555 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD-YKPTLPENVS-GKKILEVAAKDPDD 617
            |.::.:.|.|.|||..:|..|:.:.:.|||||||.|:|: |...:.|:.| |..::.|.|:|.|.
 Frog  3331 RFYLVVEATDGGSPPLSAVTTVNINLTDVNDNAPVFSQEVYSAVISEDASVGDSVVMVFAEDLDS 3395

  Fly   618 RLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENG------VAIISSLRPFDREAQKSYAIP 676
            ...|                 :..|.:.   .||.:|.      |.:|......|||....|::.
 Frog  3396 PPNG-----------------RISFSIV---NGDQDNQFVVDPIVGLIKVKDKLDREKVSGYSLL 3440

  Fly   677 IEIKDNGAPAMTGTSTLTVTIGDVNDNKMQ--PGSKSVLVYNYQGQSQDTPIG----RVYVNDPD 735
            ::.:|:||||::.|.|:.:.|.|||||..|  |.:.|.::      .::.|:|    ::.|.|.|
 Frog  3441 VQARDSGAPALSSTVTVNIDISDVNDNSPQFTPANYSAVI------QENKPVGTSIVQLVVTDKD 3499

  Fly   736 DW--DVPDKKYYWEVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDREHGQEDIPANLSVTV 798
            .:  ..|.:.......|...|.||        ::|..|.....:..:.| ||       .|.|.|
 Frog  3500 SFHNGPPFEFTIISGNEGGEFLLD--------QSGVLRSAVVFQHTISD-EH-------LLCVQV 3548

  Fly   799 RDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDNVDVFSVQL 863
            :|....|:.....:.:..|.:.....:..|::..:...:.:.....:.::..||:|..||.|..|
 Frog  3549 KDSGKPALTSQSFLHIRVIEESVHKPSAIPLEVYIVTMEDDFPGGVIGKIHATDQDIYDVLSYNL 3613

  Fly   864 KEGSPYPLTDVHFAARSATQQPYFKAVRLNGVVQMHREEIEKDVGLNITMVNINECLHEGK---- 924
            |                :.|:..||                           :|.  |:||    
 Frog  3614 K----------------SEQKSLFK---------------------------VNN--HDGKLIAL 3633

  Fly   925 GKCGSNSCTSKVELGKKPYTVSVNRTALV-GVRLDISAQCV-CRARNFTHQD------HNCRTHL 981
            |.......|..|.:....|.||::.|..| .:|.::....| .|..|.:.:|      |..|..|
 Frog  3634 GGLDGGKYTLNVSVNDGRYQVSIDVTVHVEQLRQEMLQNAVTIRFENISPEDFVGLHMHGFRRTL 3698

  Fly   982 CYNGGRCVETRNGPKCVACPVGYNGPRCQQSTRSFRGNGWAWYPPLQLCQESHLSLEFITRVADG 1046
                      ||.                                            .:|:..|.
 Frog  3699 ----------RNA--------------------------------------------VLTQKEDS 3709

  Fly  1047 LILYNGPIVPPKPEETVISDFIALELEQG---YPRLLIDFGSGTLELRVKTKKTLDDGVWHRLDI 1108
            |.:.:   :.|......:....|::::.|   .|..||              :.|.:...|    
 Frog  3710 LYIIS---IQPVAGTNQLDMLFAVQMQSGSFYKPAYLI--------------QKLSNARRH---- 3753

  Fly  1109 FWDTENVRMVVDFCRTALVSEMEDGTPPEFDDNACQARGQIPPFAESLNLNQPLQLGGLYRQHFD 1173
               .|||..:     :|::.:...|..       ||                        .||.:
 Frog  3754 ---LENVIRI-----SAILEKNCSGLD-------CQ------------------------EQHCE 3779

  Fly  1174 QTLYNWQYAFSSKGFDGCIRNVIHNSEHYDLAFPALARN-----SFPACPQTDEVCLKTEHTARC 1233
            |||     :..|...      :.:::.......|...||     :...||.:.:.|:...    |
 Frog  3780 QTL-----SIDSHSL------MTYSTARISFVCPRFYRNVRCICNGGLCPGSADPCMNKP----C 3829

  Fly  1234 WEHGNCVASLVQAK---CHCQPGWMGPGCNVPTIPTTFKAQSYVKFALSFEPDRFSTQLQLRFRT 1295
            .|...|:...|..:   |.|.||.:|. |:..| ..:|...||:|:.:|....:....|.||.||
 Frog  3830 PEDMQCIGYEVSRRPYICQCPPGKLGE-CSGHT-SLSFSGNSYIKYRVSENSKKHEFSLALRMRT 3892

  Fly  1296 REQGGELFRVSDQHHREYAILELRRGHLQFRYNLNSMRNEEQLLTLTAIAVNDGQWHVIRISRYG 1360
            .:....:...   ......||::..|.|.|:.:..|   ...:|.::...||||.||.:.:...|
 Frog  3893 LQNNAIIMYT---RANPCMILKIVDGKLWFQLDCGS---GPGILGISGRTVNDGNWHSVYLDLNG 3951

  Fly  1361 SAALMELDGGESRRYNESFHFTGHQWLTIDKQEGVYAGGKAEYTGIKTF------EVQSDFQRSC 1419
            :...:.||.....|....|:|.     |:.....:|.|.:.:...:::.      :|...|| .|
 Frog  3952 NFTSLSLDDSYVERRKAPFYFQ-----TLSPDSAIYFGAQVQVENVRSLTDKRNTQVLGGFQ-GC 4010

  Fly  1420 LDDIRLDGKHLPL-----------------------------PPAMNGTQWGQAT---------- 1445
            ||.:.|:...|||                             .|..||   |..|          
 Frog  4011 LDSVVLNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACERKPCQNG---GSCTNVPSGGYQCA 4072

  Fly  1446 -MARNLERNCPSN------RPCSNVICPDPFDCVDLWNEYECTCSEGRIMSSDTKGCV---DRNE 1500
             .::.:.:||.|.      .||.|....||     :.:.:.|:|..|      .:|..   |.||
 Frog  4073 CPSQFIGKNCESEITACYPNPCRNGGTCDP-----IGSSFICSCRTG------LRGLTCEEDINE 4126

  Fly  1501 CLDLPCLNGATCINLEPRLRYRCICPEGYWGENCEL-------VQEGQRLKLSMGALGAIFVCLI 1558
            |....|.||.||:|:..  .:.|.|..||.|:.|.|       :|.|... :....|..|.|.|.
 Frog  4127 CEREDCENGGTCVNVFG--SFFCNCSHGYVGQYCGLRPVVVPNIQAGHSY-VGKEELIGIAVVLF 4188

  Fly  1559 IILILALIFVLYSRK--RKTTKK---------------KKRSGPE-KDVRETVISYEDEGGGEDD 1605
            :|.:|.::|:::.:|  ||...:               .|.:|.: |::|         .||:..
 Frog  4189 VIFVLIILFIVFRKKVFRKNYSRNNITLVQDPATAALLNKTNGIQFKNLR---------SGGDSR 4244

  Fly  1606 MTAFDITPLQIPISAQG---------------------------------GPPDIAACKMPIIYP 1637
            ....::.|.|:|:....                                 .|..:.|.:..::..
 Frog  4245 NIYQEVGPPQVPVRPMAYTPCFQSDSRNNLDKMVDGLGVEHQEMTTFHPESPRILTARRGVVVCS 4309

  Fly  1638 VMTLLPPGQELNVAYLMEE----RKQRIDKDNNAPPFDDLRNFT-FEGSGSIAESLSSLASGTDD 1697
            |...||     :|:....:    ||...|..|:....|.....| |.||.          .|::.
 Frog  4310 VAPNLP-----SVSPCRSDCDSIRKGAWDTGNDCKGLDATEEVTCFVGSN----------KGSNS 4359

  Fly  1698 ENQDFNYLQNWGPRFNALAAMYVH 1721
            |||..|..|:.....||.....:|
 Frog  4360 ENQSLNSFQSDSCDDNASIVTVIH 4383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 24/100 (24%)
Cadherin_repeat 140..248 CDD:206637 28/114 (25%)
Cadherin_repeat 256..359 CDD:206637 30/102 (29%)
CA 388..483 CDD:214520 29/105 (28%)
Cadherin_repeat 489..586 CDD:206637 34/97 (35%)
Cadherin_repeat 594..703 CDD:206637 30/115 (26%)
EGF_CA 977..1010 CDD:238011 4/32 (13%)
LamG 1013..1198 CDD:238058 24/187 (13%)
EGF_2 1233..1259 CDD:400365 9/28 (32%)
LamG 1265..1426 CDD:238058 38/166 (23%)
EGF_CA 1497..1535 CDD:238011 15/37 (41%)
CADH_Y-type_LIR 1662..1719 CDD:460041 15/57 (26%)
fat3XP_031753199.1 Cadherin_repeat 49..155 CDD:206637
Cadherin_repeat 164..264 CDD:206637
Cadherin_repeat 382..470 CDD:206637
Cadherin_repeat 479..576 CDD:206637
Cadherin_repeat 594..674 CDD:206637
Cadherin_repeat 735..829 CDD:206637
Cadherin_repeat 837..933 CDD:206637
Cadherin_repeat 942..1020 CDD:206637
Cadherin_repeat 1051..1146 CDD:206637
Cadherin_repeat 1154..1252 CDD:206637
Cadherin_repeat 1260..1350 CDD:206637
Cadherin_repeat 1369..1481 CDD:206637
Cadherin_repeat 1490..1587 CDD:206637
Cadherin_repeat 1596..1687 CDD:206637
Cadherin_repeat 1700..1790 CDD:206637
Cadherin_repeat 1798..1904 CDD:206637
Cadherin_repeat 1923..1998 CDD:206637
Cadherin_repeat 2012..2105 CDD:206637
Cadherin_repeat 2113..2204 CDD:206637
Cadherin_repeat 2216..2308 CDD:206637
Cadherin_repeat 2316..2415 CDD:206637
Cadherin_repeat 2423..2515 CDD:206637
Cadherin_repeat 2525..2621 CDD:206637
Cadherin_repeat 2629..2724 CDD:206637
Cadherin_repeat 2737..2835 CDD:206637 10/32 (31%)
Cadherin_repeat 2844..2945 CDD:206637 24/100 (24%)
Cadherin_repeat 2953..3050 CDD:206637 28/114 (25%)
Cadherin_repeat 3060..3152 CDD:206637 31/101 (31%)
Cadherin_repeat 3160..3257 CDD:206637 31/123 (25%)
Cadherin_repeat 3266..3362 CDD:206637 34/96 (35%)
Cadherin_repeat 3370..3467 CDD:206637 30/116 (26%)
Cadherin_repeat 3476..3567 CDD:206637 21/112 (19%)
Cadherin_repeat 3581..3663 CDD:206637 22/126 (17%)
Laminin_G_2 3890..4019 CDD:460494 31/140 (22%)
EGF_CA 4048..4083 CDD:238011 6/37 (16%)
EGF_CA 4082..4121 CDD:238011 11/49 (22%)
EGF_CA 4123..4158 CDD:238011 15/36 (42%)
Blue background indicates that the domain is not in the aligned region.

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