Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017950450.2 | Gene: | cdh12 / 100489783 | XenbaseID: | XB-GENE-982876 | Length: | 826 | Species: | Xenopus tropicalis |
Alignment Length: | 782 | Identity: | 201/782 - (25%) |
---|---|---|---|
Similarity: | 337/782 - (43%) | Gaps: | 162/782 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 166 DVDRPI-NIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQD-EG 228
Fly 229 GEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYS 293
Fly 294 IEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMDG----GGLKGTGTASIRV 354
Fly 355 KDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDED--ETNTFQYKVVPNSGFGADKFAM 417
Fly 418 VRNGDGT--GSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDIND 480
Fly 481 NVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAI-SDRGAVSI 544
Fly 545 QRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVSGKKILE 609
Fly 610 -VAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLR-PFDREAQKS 672
Fly 673 YAIPIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVLVYNYQGQSQDTPIGR--------- 728
Fly 729 -----------VYV-------ND---PDDWDVPDKKYYWE-----VQEHQRFKLDTDTGILTMRA 767
Fly 768 GTRRGRYQLRFKVYDREHGQEDI------------PANLSVTVRDITAEAVQQ------------ 808
Fly 809 --------AGSM--RLSHITDE--------DFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDN 855
Fly 856 VD 857 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 26/83 (31%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 38/106 (36%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 23/105 (22%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 29/97 (30%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 28/110 (25%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 18/123 (15%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
cdh12 | XP_017950450.2 | CA | 113..191 | CDD:214520 | 28/85 (33%) |
Cadherin_repeat | 197..298 | CDD:206637 | 39/107 (36%) | ||
Cadherin_repeat | 306..413 | CDD:206637 | 25/116 (22%) | ||
Cadherin_repeat | 422..517 | CDD:206637 | 28/95 (29%) | ||
Cadherin_repeat | 525..623 | CDD:206637 | 28/113 (25%) | ||
Cadherin_C | 671..818 | CDD:395833 | 30/174 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9756 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24027 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |